Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31]
287 sequences; 36,399,802 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq180 363 2e-95
seq119 105 7e-18
>seq180
Length=606450
Score = 363 bits (402), Expect = 2e-95
Identities = 1132/1731 (65%), Gaps = 45/1731 (3%)
Strand=Plus/Minus
Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247
|||| || | ||||||||||| ||||||||||| |||||| || | |||||| |
Sbjct 291536 GTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGC 291477
Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307
| | | |||| ||| | |||| || |||| |||||||| ||||| ||||| || |
Sbjct 291476 TGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAA 291417
Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367
|| | ||||| ||||| || ||||| | | ||| || | ||||||||| | |
Sbjct 291416 TGAAGGCACCACGGTCAGCAGCCATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAG 291357
Query 78368 TCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTAC--GCTCCCACCGGC 78425
|| ||| | ||||| | ||| | |||||| | | ||| | | | ||||
Sbjct 291356 TCTTGTACAGAGCCTTGATCTCGGCAGGGATGTT--GGGGATGTTCTGGATAGAACCGT- 291300
Query 78426 TCGCA-CAAT--TTCA-TTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCC 78481
| || |||| | | ||||| || | | ||| || || | |||||||
Sbjct 291299 TATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAGATCCT 291240
Query 78482 GGA----CCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAG 78537
|| ||||| |||| | | ||||||||| || ||| ||||| |||||
Sbjct 291239 TGAGAAGCCAGG----GGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAG 291184
Query 78538 ATGTTGGTCGTGTACGGCTCGAAAGCCT-CGTTGTTCCCCATGATCTGGGCGGTCGAGGC 78596
||||||| ||||| ||||| ||||| | ||||||| || | ||||| | || |||
Sbjct 291183 ATGTTGGAGGTGTAAGGCTC-AAAGCATTCGTTGTTGCCAAGAATCTGCGAAGTACTGGC 291125
Query 78597 GGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTT 78656
||| ||||| || || || || ||| || || | ||| || ||||||| || |
Sbjct 291124 GGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCG 291065
Query 78657 TAGG------CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGAT 78710
||| | |||||||| ||| | | || ||||||||| || || ||
Sbjct 291064 GAGGGGTTCCCAGTCCCAAAGGTCAGAGGGCTTGACATTCCACATGTCGAACTGGAGAAT 291005
Query 78711 ACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTC 78770
|||||| || || || || |||||||| || ||| | || |||||||| |||||||
Sbjct 291004 ACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTAGCGAGTT- 290946
Query 78771 GCAT-GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGC 78829
||| ||| ||||| |||||||| | | ||||||||| |||||| ||||| |
Sbjct 290945 GCACAGACGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCAC 290886
Query 78830 GCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGA 78889
| |||| | || || | | || ||| | |||| |||| || || || || |
Sbjct 290885 GAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAGCAAGACCTTGCA 290826
Query 78890 CGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAA 78949
| || | | | || |||||||| ||||||||||| || || ||| | | | |||||
Sbjct 290825 CACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGT 290766
Query 78950 AGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATT 79009
||| ||||||| ||||| || || ||||| |||| ||||||| || |
Sbjct 290765 GGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACGACTTGAGTGACCTCGTGCAGCT 290706
Query 79010 TGGCGAAATCAAA---ATGAT-TTCCT--TTGATGAAAGTCGGTAGGCACAGCGATGCCA 79063
| ||| || | | || ||| | |||||||||| || || ||| || || |
Sbjct 290705 TCTTGAAGTCGTAGCAAGCATCTTCATAGTTGATGAAAGAGGGCAGAGACAAGGAGGCAA 290646
Query 79064 GGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAG 79123
||||||| || || ||| || ||| | || ||||| || ||||||| || |
Sbjct 290645 GGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGG 290586
Query 79124 ACGACTT--GATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTA 79181
| ||| |||||| || | |||||| ||||| ||||| || ||| ||||||||
Sbjct 290585 AG--CTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCCTTGTA 290528
Query 79182 GCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCG 79241
| |||| | || | |||||||| ||| || |||| | ||| ||| | | | |
Sbjct 290527 GAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTG 290468
Query 79242 GGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAA 79301
||| || | ||| | ||||| | ||||| | ||||| | | ||
Sbjct 290467 AGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAA 290408
Query 79302 AGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTC 79361
| || || ||| || | ||||| ||||| |||| |||||||| || ||| ||
Sbjct 290407 TTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGTCCATTC 290348
Query 79362 CTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTC 79421
||| |||| || || |||||| || || |||||||| || || ||| |||||
Sbjct 290347 GCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTC 290288
Query 79422 GCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTC 79481
|| || | |||||| | || || ||| || || || || || || | || |||
Sbjct 290287 ACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACGTC 290228
Query 79482 GGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTT 79541
||||||||| ||||| || ||||||||||| | ||| |||||| || |||||||
Sbjct 290227 GGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACCACCCTGGTC 290168
Query 79542 GACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCC 79601
||||| || || ||||||||||| || || |||||||| ||||| |||| || ||
Sbjct 290167 AACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACC 290108
Query 79602 GTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCG--AGCAGTGGATTCCGATG 79659
|| || ||| ||| | || | || || | |||| | || | || ||
Sbjct 290107 ATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGA--TTCGGTGGGCGTTCAAGCCAATA 290050
Query 79660 CCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATC 79719
|| || | | |||||| || || || |||||| || |||||||| || || ||
Sbjct 290049 CCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCATCAATG 289990
Query 79720 GAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCG 79779
||| ||||||||| | || |||||||| || | ||| || | |||||||||
Sbjct 289989 CTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACCGGCG 289930
Query 79780 TTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTT--TTGGCTCATCAGATCGTACGTCT 79837
||||| | || || | || || ||||||||||| ||| ||| || | ||| ||||
Sbjct 289929 TTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTG--ACATGAGGTTGTATGTCT 289872
Query 79838 CCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGA 79888
|| ||| ||| | ||||| || ||| || || ||||| |||||||
Sbjct 289871 CCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGACTCGCATGA 289821
Score = 340 bits (376), Expect = 2e-88
Identities = 913/1377 (66%), Gaps = 32/1377 (2%)
Strand=Plus/Plus
Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175
||||||||||||| || || ||| || ||||| | ||| ||| |||||||||
Sbjct 289821 TCATGCGAGTCGCTGTTGGAATCTGGGGTGACGATATTGAGCGTGTCTTGGAGACATACA 289880
Query 19176 ACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACG 19234
|||| ||| | || ||||||||||| || || | || || | ||||||||||||||
Sbjct 289881 ACCTCATGT-CAAGCAAGTTCTTCACTCATGCAAGCCCCACTTTATTCAACGCCGGTACT 289939
Query 19235 AACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGC 19294
| || ||| | || || ||||| || | ||||||||| ||||||||||| ||
Sbjct 289940 CCACAGCCTCAGCTTTCATCATGCTTCCTTGTTGATATGAAGGAGGACAGCATTGATGGT 289999
Query 19295 ATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATC 19354
|||||||| || |||||| || || || |||||| | | || ||||| || |
Sbjct 290000 ATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCTGGTGGTATTGGCTTG 290059
Query 19355 CACTGCT--CGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCG 19412
|| | ||||| ||| | | ||| | ||| || || || || ||
Sbjct 290060 AACGCCCACCGAAT--CCGTGCCACTGGCTCTTACATCGCCGGTACCAATGGTACTTCCA 290117
Query 19413 ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGG 19472
|||||||||| || ||||| || || ||||||||||| || | ||||| ||||||| |
Sbjct 290118 ACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTACGTTGACCAGGGTG 290177
Query 19473 GCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGG 19532
| ||| || || | |||||||||||||| |||||||||||||| |||||| | |
Sbjct 290178 GTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAGCCATGGCACGCCGACGTCTTCG 290237
Query 19533 ATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCA 19592
| ||||| || || || ||| || ||| | |||||| | ||| ||| ||||| |||
Sbjct 290238 AGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAGGAGGTCCGCGCTCGTGACCTGTTCT 290297
Query 19593 CGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACC 19652
|| | ||||| || || || |||||| || || |||| ||| |||||| |
Sbjct 290298 TAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAGAGAAACGGCGAATGGACTC 290357
Query 19653 TGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGT 19712
| |||||||| |||||||||||||||| | ||| |||||| || | || | |
Sbjct 290358 TCATGTGCCCTAACGAATGCCCTGGCCTTGCTGACTGCTACGGTGACGAATTTGAGGCTC 290417
Query 19713 TGTACCGGACTTACG-TAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTC 19771
||||| | |||| || || || || ||| || ||| | | | |
Sbjct 290418 TGTACGAAAAGTACGAGAGAGAGGGTAAGGGTC-GCAAGTCTATCAAGGCTCAGAAGCTT 290476
Query 19772 TGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGA- 19830
||| || | | || | |||| |||||||| | || | |||| |||||||||
Sbjct 290477 TGGTACGCCATTCTTGAGGCCCAGACAGAGACCGGAAACCCTTTCATGCTCTACAAGGAT 290536
Query 19831 CGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATC--AAGTCGTCCAACCTG 19888
| | || | || |||| || || |||||| | || | ||| ||| |||||||||
Sbjct 290537 CACTGCAATCG-CAAGAGTAACCAAAAGAACCTTGGTACCATCCGAAG--CTCCAACCTG 290593
Query 19889 TGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCC 19948
|| ||||| ||||| || | | || || ||| || || || || || || |||
Sbjct 290594 TGCACTGAGATCATTGAATACTGCGCCCCTGATGAGGTCGCTGTTTGCAACCTTGCCTCC 290653
Query 19949 CTGTGCCTGCCGACTTTCGTCA------AGGCCTCCTCCTTCGACTTTGCCAAATTGTAC 20002
||| ||||| ||||| ||| | | | | || |||||| || || ||
Sbjct 290654 TTGTCTCTGCCCTCTTTCATCAACTATGAAGATGCTTGCTACGACTTCAAGAAGCTGCAC 290713
Query 20003 GAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCG 20062
||||| || | ||||| || ||| |||| ||||||| ||| |||||
Sbjct 290714 GAGGTCACTCAAGTCGTTGTCCGCAATTTGAACAAGATCATCGACGTCAACCACTACCCT 290773
Query 20063 ACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGC 20122
| | | ||| || || || ||||| ||||| || || | | || || || ||
Sbjct 290774 GTCCAAGAGGCTCGTAACAGCAACATGCGTCACCGACCCATTGGTCTTGGTGTGCAAGGT 290833
Query 20123 CTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCTC 20182
|| || || | ||| | ||| || | | || || ||| |||| || |||||
Sbjct 290834 CTTGCTGATGCCTTCCTTGCCCTCCGCATGCCCTTTGAGTCTCCTGAGGCTCGTGAGCTG 290893
Query 20183 AACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCC-TCCTGGAATCGTGCGAACTCGC 20241
|||||| ||||||||| || | |||||||| |||| | || |||| |||||||
Sbjct 290894 AACAAGCAAATCTTCGAGACCATCTACCACGCTGCCCTTACTACGTCTGTGC-AACTCGC 290952
Query 20242 CAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCCA 20301
|| ||||| || || ||| || |||||||| || || || || |||||||| |||||
Sbjct 290953 TAAGGAGGAAGGTCCCTACTCCACCTTCAAGGGCTCCCCTGCCTCTGAGGGTATTCTCCA 291012
Query 20302 GCCGGACATGTGGGGCGTCA------CTGA-GAATGAGTTTTGGAGCGCCCTCAAGGTTG 20354
| ||||||||| |||| |||| || | | ||| | ||||| | |
Sbjct 291013 GTTCGACATGTGGAATGTCAAGCCCTCTGACCTTTGGGACTGGGAAC-CCCTCCGAGAGG 291071
Query 20355 AGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGA 20414
| ||||||| ||||| | |||||| ||||||| || || ||||| |||||| |
Sbjct 291072 ATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTGCTCCTATGCCTACCGCCAGTA 291131
Query 20415 CCGCCCAGATCATGGGGAACAACG-AGGCTTTCGAGCCGTACACGACCAACATCTAC 20470
| | ||||| | || ||||||| | ||||| ||||| ||||| |||||||||||
Sbjct 291132 CTTCGCAGATTCTTGGCAACAACGAATGCTTT-GAGCCTTACACCTCCAACATCTAC 291187
>seq119
Length=1526710
Score = 105 bits (116), Expect = 7e-18
Identities = 111/146 (76%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032
||||| || ||||| | |||||||| ||| || || ||||||||| || | ||
Sbjct 630104 TTTGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTT 630045
Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092
| | || ||||||||||| ||||||||||||||||| || ||||| || || ||||||
Sbjct 630044 GCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAG 629985
Query 60093 CTGATTTCCCGGGACGAGGGCCTCCA 60118
|| ||||| || || ||||| || ||
Sbjct 629984 CTCATTTCTCGTGATGAGGGTCTTCA 629959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548522832167280
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