Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31]
287 sequences; 36,399,802 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq267 113 4e-20
>seq267
Length=334782
Score = 113 bits (124), Expect = 4e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069
||||||||||| ||||||| ||||| || || | |||||| | || || | |||||
Sbjct 143242 TGACCGGCAAGACTATTACCCTTGAGGTCGAGTCATCCGACACTATCGACAATGTCAAGT 143183
Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129
|| || || ||||| || || || || || ||||| ||||| || || | ||||||||
Sbjct 143182 CCAAGATCCAGGACAAGGAGGGTATCCCTCCTGATCAGCAGCGATTGATTTTCGCCGGCA 143123
Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189
| || | || ||| || ||| | ||||| |||||||| || ||||| || ||| | |
Sbjct 143122 AGCAGCTCGAGGACGGTCGAACCCTCTCCGACTACAACATCCAGAAGGAATCAACCCTTC 143063
Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGG 27214
| |||| | ||| | || |||||
Sbjct 143062 ACCTGGTCCTTCGTCTTCGTGGTGG 143038
Score = 107 bits (118), Expect = 2e-18
Identities = 143/199 (72%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045
|||||||||| || || || || ||||||||||| ||||||| || || || || | |
Sbjct 143548 CCATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACTATTACCCTCGAGGTTGAGTCAT 143489
Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105
| || | || || | || || || || || ||||| || ||||| || || ||||
Sbjct 143488 CTGATACTATCGACAACGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGATC 143429
Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165
| ||||| || || | ||||||||| || | || || | ||| | ||||| ||||
Sbjct 143428 AGCAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACA 143369
Query 27166 ACATTCAAAAGGAGTCGAC 27184
|||| || |||||||||||
Sbjct 143368 ACATCCAGAAGGAGTCGAC 143350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434916839730240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |