Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31] 287 sequences; 36,399,802 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq267 113 4e-20 >seq267 Length=334782 Score = 113 bits (124), Expect = 4e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069 ||||||||||| ||||||| ||||| || || | |||||| | || || | ||||| Sbjct 143242 TGACCGGCAAGACTATTACCCTTGAGGTCGAGTCATCCGACACTATCGACAATGTCAAGT 143183 Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129 || || || ||||| || || || || || ||||| ||||| || || | |||||||| Sbjct 143182 CCAAGATCCAGGACAAGGAGGGTATCCCTCCTGATCAGCAGCGATTGATTTTCGCCGGCA 143123 Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189 | || | || ||| || ||| | ||||| |||||||| || ||||| || ||| | | Sbjct 143122 AGCAGCTCGAGGACGGTCGAACCCTCTCCGACTACAACATCCAGAAGGAATCAACCCTTC 143063 Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGG 27214 | |||| | ||| | || ||||| Sbjct 143062 ACCTGGTCCTTCGTCTTCGTGGTGG 143038 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 |||||||||| || || || || ||||||||||| ||||||| || || || || | | Sbjct 143548 CCATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACTATTACCCTCGAGGTTGAGTCAT 143489 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 | || | || || | || || || || || ||||| || ||||| || || |||| Sbjct 143488 CTGATACTATCGACAACGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGATC 143429 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 | ||||| || || | ||||||||| || | || || | ||| | ||||| |||| Sbjct 143428 AGCAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACA 143369 Query 27166 ACATTCAAAAGGAGTCGAC 27184 |||| || ||||||||||| Sbjct 143368 ACATCCAGAAGGAGTCGAC 143350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434916839730240