Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31]
287 sequences; 36,399,802 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq272 114 3e-20
seq237 93.3 1e-13
seq267 91.5 3e-13
>seq272
Length=530880
Score = 114 bits (126), Expect = 3e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| | ||||| || ||||| || ||||||||||| ||| | || | |||||
Sbjct 332697 GAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATC 332756
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || || |||||||| | ||||||||||| | ||| || ||||| ||
Sbjct 332757 CTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 332816
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || ||||| | || | | |||| ||| ||| || ||||| || || ||
Sbjct 332817 CTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGT 332876
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| |||||||| ||||| ||||| | ||||||
Sbjct 332877 CTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 332909
>seq237
Length=369279
Score = 93.3 bits (102), Expect = 1e-13
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||||||||| |||| | |||| ||||| || || || |||||||||||
Sbjct 287547 TTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 287488
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
| | |||||| |||| | ||| || ||||| || || || || |||||| | ||
Sbjct 287487 AATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 287428
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAA 152095
| | |||| || ||| || || || || || || |||||||| || |||||||||||
Sbjct 287427 ATGGTGTCCGATGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 287369
>seq267
Length=334782
Score = 91.5 bits (100), Expect = 3e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| || || ||||| ||||| || ||||||||||| |||| | || | |||||
Sbjct 143334 GAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 143393
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || |||||||| || | | |||||| || | | ||| || ||||| ||
Sbjct 143394 CTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTC 143453
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || || || | || | | || || ||| || || || ||||||||
Sbjct 143454 CTGGATCTTGGACTTCACGTTGTCGATAGTATCAGATGACTCAACCTCGAGGGTAATAGT 143513
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || | ||||| ||||||| ||||||
Sbjct 143514 CTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 143546
Score = 89.7 bits (98), Expect = 1e-12
Identities = 141/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| || ||||| || || || || ||||||||||| |||| | |||| || ||
Sbjct 143053 AGGACCAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCGTCC 143112
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || |||||||| || | | |||||| || | | ||| || ||||| ||
Sbjct 143113 TCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATACCCTCCTTGTCC 143172
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || |||||| | || | |||| || ||| || ||||| ||||||||
Sbjct 143173 TGGATCTTGGACTTGACATTGTCGATAGTGTCGGATGACTCGACCTCAAGGGTAATAGTC 143232
Query 152073 TTGCCCGTGAGAGTCTTCACGA 152094
||||| || | ||||| ||||
Sbjct 143233 TTGCCGGTCAAGGTCTTGACGA 143254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153816557184577
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |