Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq15 212 7e-50 >seq15 Length=1128247 Score = 212 bits (234), Expect = 7e-50 Identities = 600/913 (66%), Gaps = 18/913 (2%) Strand=Plus/Minus Query 53756 ATTATCTCAGTGCAAAGATT---ACTACACTTGATGGTTCCTAAATTTTGTTGATTACTC 53812 || || ||||||||||| || ||||| |||||| || | || | ||| || ||| Sbjct 832486 ATAATTTCAGTGCAAAGGTTGGAACTACG---GATGGTACCGAGGTTCTTTTGGTTGCTC 832430 Query 53813 TTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCT 53872 || ||| || |||||||| || || |||||||| | || || ||| |||||| || Sbjct 832429 TTGCGGTTGCAAGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCA 832370 Query 53873 ATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCT--CTT- 53929 | ||| || | ||||| ||||||| || | ||| | ||| | ||| Sbjct 832369 AGAATGGCGTACCAGAGCTTCTGAGCCTTAATGGTC---TTGCGACCCTTGCCCTCCTTC 832313 Query 53930 TCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACAT 53989 ||||| | |||| || ||||| ||||| | | | | | ||||| || Sbjct 832312 TCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCAC 832253 Query 53990 TCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCA 54049 |||| || ||||||| | ||| || |||| | | || || ||||| || |||||| Sbjct 832252 TCATTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCA 832193 Query 54050 GGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTT 54109 || |||||||| || | || || || | || | ||||| || || ||||| Sbjct 832192 GGGATCCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTA 832133 Query 54110 TTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACT 54169 ||||| |||||| | | | |||||| ||||| || || | ||| |||| | | | Sbjct 832132 CGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCA 832073 Query 54170 CCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAAC 54229 || || || ||||| || ||||| || | || | ||| ||||| || | || | | | Sbjct 832072 CCGGGTCGCTTGTTGCCGCCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGC 832013 Query 54230 ATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGA 54289 || |||| || |||||| |||| ||| ||||| |||| ||| || ||| | ||||| Sbjct 832012 ATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGG 831953 Query 54290 ATAT--TACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 54347 ||| | | ||| | |||| || || || ||||| || ||||| | || || | Sbjct 831952 ATACGGTGCACATTCA--GACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCT 831895 Query 54348 TTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAG 54407 | | ||||| ||||| ||||| ||||| |||||| |||| | || | || || | Sbjct 831894 TGAGAGTATCGTAGATTCCCTCAATACTGTCATCCTTCATATCAACCAAGAAGCAAGATG 831835 Query 54408 ACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATT 54467 ||| |||| | || || || ||||| || | || || ||||| ||||| || | | Sbjct 831834 ACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACT 831775 Query 54468 TTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCC-CATTGATGAATTCCT 54526 | ||| | |||||||| ||||| | || || ||||| || || | || Sbjct 831774 TGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGA-TACCA 831716 Query 54527 ACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGC 54586 || | |||||||| | |||||||||||| | || || ||||| || || || || Sbjct 831715 ACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCTTGAGG 831656 Query 54587 AAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAA 54646 | ||| ||| |||||||| || || ||||| || | |||| || || || || || Sbjct 831655 AGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAG 831596 Query 54647 ATAATAACTGAGT 54659 | ||| | |||| Sbjct 831595 ACAATGGCAGAGT 831583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593718564598320