Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq15 284 1e-71 seq4 149 6e-31 seq3 114 1e-20 >seq15 Length=1128247 Score = 284 bits (314), Expect = 1e-71 Identities = 637/954 (67%), Gaps = 2/954 (0%) Strand=Plus/Minus Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086 |||||||| ||||| || || |||||||| || |||||| | |||||| || || Sbjct 832531 GAGGCAAGGTTGCAGACAGCGACCTCGTCGGGGGCACAGTACTCGATAATTTCAGTGCAA 832472 Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146 || ||| || || || || | || | |||||||| || || ||||| | |||| Sbjct 832471 AGGTTGGAACTACGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAAGCATCC 832412 Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206 |||||||||||| | || | || ||||| ||| | ||| | || || ||| | Sbjct 832411 TTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAGAGC 832352 Query 23207 GTCTGAGCGTGAACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGC 23265 ||||||| | || ||| || ||| ||| || | ||||||||||| ||||| || Sbjct 832351 TTCTGAGCCTTAATG-GTCTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGC 832293 Query 23266 GTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325 || || || | ||||| |||||||| ||||| || | | | || ||||| || | Sbjct 832292 CTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATTGGGGCACATCAGTGT 832233 Query 23326 CCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385 ||| || |||||||| || |||| |||||||| || ||||| || || ||| Sbjct 832232 CCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAA 832173 Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445 || || ||||| || |||||||| || ||| |||||| | ||| | || || || Sbjct 832172 AAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAA 832113 Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505 || || | ||||| ||||||||||| | |||||| || || |||| ||| |||||||| Sbjct 832112 GACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCGCC 832053 Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 ||| ||||| || || || ||||||||| | || | ||||| || || | ||| || || Sbjct 832052 CTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCATTCGA 831993 Query 23566 CGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACC 23625 | ||| || || | || || | || || | ||| || | | ||| Sbjct 831992 TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCACATTCAGACC 831933 Query 23626 TATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685 || || || || || || ||||| || || || ||||| |||||||| ||||| Sbjct 831932 AATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTC 831873 Query 23686 GATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGC 23745 || ||||| || || | | |||||||| || || |||| ||| | | || || | Sbjct 831872 AATACTGTCATCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCC 831813 Query 23746 GGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGT 23805 ||| ||| || || ||| || ||||| ||| | | ||||| |||||||| || Sbjct 831812 GGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATCAGATTGTATGT 831753 Query 23806 GTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTA 23865 || | | | || || || || || ||||| | | || ||||| ||||||| Sbjct 831752 CTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGACACACGCATGATCATGTG 831693 Query 23866 TTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTT 23925 ||||| | |||||| | |||| ||| |||| || ||||| || | || || || Sbjct 831692 CTGAGGGCGCTCGACAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTT 831633 Query 23926 AAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979 || ||||| || | || | || || || || | || ||||| || | ||| Sbjct 831632 GAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGACAATGGCAGAGTCCAA 831579 >seq4 Length=3324183 Score = 149 bits (164), Expect = 6e-31 Identities = 545/839 (65%), Gaps = 27/839 (3%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 |||||| | |||||||| ||||| || || || || ||||| | || || | || || Sbjct 1758740 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTC 1758681 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAAT-CTGA-GAGAAATTTTATTAAAC 57687 || |||||||| ||| ||| | || | || | |||| ||| | || | | Sbjct 1758680 TCCAAGGATCTCCACGACTGGAACAACCGCCT-GACTGCTGACGAGCAGTTCTTCGTCTC 1758622 Query 57688 ACGTGT--TGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAG 57745 | | | | || || ||||| || || ||||| ||||| |||||||| | ||||| | Sbjct 1758621 TCATATCCTTGCTTTCTTCGCTGCCTCAGATGGCATTGTCAACGAGAACCTCGTCGAGCG 1758562 Query 57746 ATTTTCACAAG--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCC 57803 ||||| | | || || | | ||||| | ||||| ||||| || || | Sbjct 1758561 --TTTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGCTTCTACGGCTTCCAGATCATG 1758504 Query 57804 ATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAAC 57863 || || ||| | || || || | || || || |||||||| || ||| | ||||| | Sbjct 1758503 ATGGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATCAAGGAGCCC 1758444 Query 57864 GACGAGA-AACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGC 57922 | | || ||| || || |||||||| || || || || ||| ||| |||||||| Sbjct 1758443 GCCCAGCGAACCTAC-CTCTTCAACGCCATTGACACTATTCCCTGCATCCGAAAGAAGGC 1758385 Query 57923 AGAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAAT 57979 || ||| | ||| |||||| | | | || || | || ||| || | || | Sbjct 1758384 TGACTGGGCCATCCGATGGATCCAG---GATAAGGACTCCTCCTTTGCCCAGCGTCTCGT 1758328 Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGAT 58039 || ||||| ||||| || ||||| ||||| || ||| || | || || ||| | Sbjct 1758327 TGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTGGCT 1758268 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 ||||| || || || |||||||| ||||| || ||||||| | || || || ||||| Sbjct 1758267 CAAGAAGCGTGGTCTCATGCCCGGTCTGACTTTCTCCAACGAGCTCATCTCTCGTGACGA 1758208 Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCG 58159 |||||| || ||||| ||||| ||||| | |||||||| |||| | | | Sbjct 1758207 GGGTCTTCACACTGACTTTGCCTGCCTCCTCCACTCTCAC---CTCAAGGGTCGTGCCAG 1758151 Query 58160 GGATCGCATCTT---GGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216 | | || | ||| || || || || || ||| | || || | ||||| |||| Sbjct 1758150 CAAGCAGATGATTCAGGATATCATTACTGATGCCGTCACCATTGAGCAGGAGTTCCTCAC 1758091 Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276 || || || || ||| | ||||| |||||| ||| | ||| |||||||||| Sbjct 1758090 TGAGGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGA 1758031 Query 58277 GTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAA 58334 ||| || || || | || | ||| || | |||| ||| ||||| | | Sbjct 1758030 GTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTC--TACAAGGCCACC 1757973 Query 58335 AATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 || || || || || ||| | ||||| || | |||||||| ||||| ||||| || Sbjct 1757972 AACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAA 1757914 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| ||||| || || || || ||||||||| | || || || | Sbjct 2716707 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 2716648 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| |||| | ||||| | || ||||||||| ||| | || |||||| Sbjct 2716647 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 2716588 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||||||||| ||| | || || || ||||||| || Sbjct 2716587 CAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 2716528 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || || || || ||||| || Sbjct 2716527 AACATCCAGAAGGAGTCCACCCTCCACCTGGTCCT 2716493 >seq3 Length=3549891 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| ||||| || |||||| |||| || || | || Sbjct 3006398 CATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCATC 3006457 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | |||| | ||||| | || ||||||||| || | || |||||||| Sbjct 3006458 CGACACTATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCCCCCGACCA 3006517 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| || | || ||||| ||||| ||| | || ||| ||| | ||||| || Sbjct 3006518 GCAACGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAA 3006577 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||| || || || ||||||||||| || || Sbjct 3006578 CATTCAGAAGGAGTCCACTCTTCATCTTGTTCT 3006610 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||||| || ||||| || || || | || || ||| | | Sbjct 3007137 ATGCAGATTTTCGTGAAGACTCTCACTGGCAAGACCATTACTCTTGAGGTCGAATCCAGC 3007196 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | || || | || ||| ||||| || | || || || ||| Sbjct 3007197 GACACTATCGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATCCCCCCTGATCAG 3007256 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| || ||| ||||||| | || ||||||| || ||| Sbjct 3007257 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAAGATGGTCGCACCTTGAGCGACTACAAC 3007316 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 || || || || || |||||||| || || || |||| Sbjct 3007317 ATCCAGAAGGAGTCAACTCTTCACCTCGTTCTCCGACT 3007354 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| || || ||||| || |||||| | || || || | ||||| | ||| Sbjct 3006691 TCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGTCATCCGATACCATCG 3006750 Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | | || || || || ||||||||| || | || || ||||||||||| || | Sbjct 3006751 ACAATGTTAAGTCGAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGCCTGA 3006810 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | || ||||| || || | |||||| ||| | ||| || |||||||| || | Sbjct 3006811 TCTTTGCTGGAAAGCAACTCGAAGACGGCCGAACTCTTGCCGACTACAACATTCAGAAGG 3006870 Query 31383 AATCGACTCTTCATCTGGTACT 31404 |||| || |||||||| || || Sbjct 3006871 AATCTACCCTTCATCTCGTCCT 3006892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445764121019280