Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq15 104 5e-17 >seq15 Length=1128247 Score = 104 bits (114), Expect = 5e-17 Identities = 178/253 (70%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || ||||| |||||||||| || || ||| |||||||| || || |||||||| Sbjct 831928 CCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATA 831869 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT-CCACA 94910 || ||||| | | | | | |||||| || || | |||||| ||| | | || Sbjct 831868 CTGTCATCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGC-TGAGGGGTGCCGGC 831810 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 ||| || || |||||||||||||| || || | | || ||||| |||| ||||| || Sbjct 831809 ATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATCAGATTGTATGTCTC 831750 Query 94971 AATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCT 95029 | ||| | ||| || | | || || | || |||| ||||||||| ||||||| || Sbjct 831749 CAAGACTCGCTCGATATCATCACCCCAGA-TACCAACAGACACACGCATGATCATGTGCT 831691 Query 95030 GAGGGCGCTCAAC 95042 |||||||||| || Sbjct 831690 GAGGGCGCTCGAC 831678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989578814270595