Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq15 210 3e-49 >seq15 Length=1128247 Score = 210 bits (232), Expect = 3e-49 Identities = 602/914 (66%), Gaps = 20/914 (2%) Strand=Plus/Minus Query 65787 ATTATCTCAGTGCAAAGATT---ACTACACTTGATGGTTCCTAAATTTTGTTGATTACTC 65843 || || ||||||||||| || ||||| |||||| || | || | ||| || ||| Sbjct 832486 ATAATTTCAGTGCAAAGGTTGGAACTACG---GATGGTACCGAGGTTCTTTTGGTTGCTC 832430 Query 65844 TTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCT 65903 || ||| || |||||||| || || |||||||| | || || ||| |||| | || Sbjct 832429 TTGCGGTTGCAAGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCA 832370 Query 65904 ATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCT--CTT 65960 | ||| || | ||||| | || ||||||| || | ||| | ||| | ||| Sbjct 832369 AGAATGGCGTACCAGA-GCTTCTGAGCCTTAATGGTC---TTGCGACCCTTGCCCTCCTT 832314 Query 65961 -TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACA 66019 ||||| | |||| |||||||| ||||| | | | | | ||||| || Sbjct 832313 CTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCA 832254 Query 66020 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 66079 |||| || ||||||| | ||| || |||| | | || || ||||| || ||||| Sbjct 832253 CTCATTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATC 832194 Query 66080 AGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 66139 ||| |||||||| || | || | || | || | ||||| || || ||||| Sbjct 832193 AGGGATCCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTT 832134 Query 66140 TTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAAC 66199 ||||| |||||| | | | |||| | ||||| || || | ||| ||||| | | | Sbjct 832133 ACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGC 832074 Query 66200 TCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAA 66259 || || || ||||| || ||||| || | || | ||| ||||| || | || | | Sbjct 832073 ACCGGGTCGCTTGTTGCCGCCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAG 832014 Query 66260 CATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACG 66319 ||| |||| || |||||| |||||||| ||||| |||| ||| || ||| | ||||| Sbjct 832013 CATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACG 831954 Query 66320 AATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 66377 ||| | | ||| | |||| || || || ||||| || ||||| | || || Sbjct 831953 GATACGGTGCACATTCA--GACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTC 831896 Query 66378 TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTA 66437 || | ||||| ||||| ||||| ||||| |||||| |||| | || | || || Sbjct 831895 TTGAGAGTATCGTAGATTCCCTCAATACTGTCATCCTTCATATCAACCAAGAAGCAAGAT 831836 Query 66438 GACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 66497 |||| |||| | || || || ||||| || | || || ||||| ||||| || | Sbjct 831835 GACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAAC 831776 Query 66498 TTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCC 66556 || ||| | |||||||| ||||| | || || ||||| || || | || Sbjct 831775 TTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGA-TACC 831717 Query 66557 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAA 66616 || | |||||||| | |||||||||||| | || || ||||| || || || | Sbjct 831716 AACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCTTGAG 831657 Query 66617 CAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 66676 | ||| ||| |||||||| || || ||||| || | |||| || || || || || Sbjct 831656 GAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATA 831597 Query 66677 AATAATAACCGAGT 66690 | ||| | |||| Sbjct 831596 GACAATGGCAGAGT 831583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658169435091560