Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq15 224 1e-53 seq4 109 8e-19 >seq15 Length=1128247 Score = 224 bits (248), Expect = 1e-53 Identities = 726/1105 (66%), Gaps = 34/1105 (3%) Strand=Plus/Minus Query 79666 ATTATTTCAGTGCAGAGGTT---ACTACACTTAATGGTTCCTAAATTTTGTTGATTACTC 79722 || ||||||||||| ||||| ||||| ||||| || | || | ||| || ||| Sbjct 832486 ATAATTTCAGTGCAAAGGTTGGAACTACGG---ATGGTACCGAGGTTCTTTTGGTTGCTC 832430 Query 79723 TTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCT 79782 || ||| || |||||||| || || ||||| || | || || ||| |||| | || Sbjct 832429 TTGCGGTTGCAAGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCA 832370 Query 79783 ATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGACTTGTATCTCTTTTCT--CTT 79839 | ||| || | ||||| | || ||||||| || | |||| | ||| | ||| Sbjct 832369 AGAATGGCGTACCAGA-GCTTCTGAGCCTTAATGGT---CTTGCGACCCTTGCCCTCCTT 832314 Query 79840 -TCGTATTGT--GTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGA 79896 ||||| | | ||| | | | |||||||| ||||| | ||| | | ||||| Sbjct 832313 CTCGTACTTTTCGTACAGAGCC--TCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGG 832256 Query 79897 CATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTT--ACTCGTTTCATAAAGA 79954 || || | || ||||||| | ||| || || | || ||| || || ||||| || | Sbjct 832255 CACTCATTGGGGCACATCAGTGTCCAGTCACCGT--TCTTTTCAACACGCTTCATGAAAA 832198 Query 79955 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTAT 80014 ||||||| |||||||| || | || || || | || | |||||| || || | Sbjct 832197 GATCAGGGATCCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGGT 832138 Query 80015 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 80074 |||| ||||| |||||| | | | |||||| ||||| || || | ||| ||||| | Sbjct 832137 TCTTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAA 832078 Query 80075 TAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 80134 | | || ||||| ||||| || ||||| || | || | ||| ||||| || | || | Sbjct 832077 AAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACAC 832018 Query 80135 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGG 80194 | ||| |||| || |||||| |||||||| ||||| |||| ||| || ||| | | Sbjct 832017 GAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAG 831958 Query 80195 CACGAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 80252 |||| ||| | | ||| | |||| || || || ||||| || ||||| | || || Sbjct 831957 CACGGATACGGTGCACATTCA--GACCAATACCACCAGCCATCTTGGAGATCATGGCACA 831900 Query 80253 TCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACA 80312 || | ||||| ||||| ||||| || || ||||| |||| | || | || || Sbjct 831899 GGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCATCCTTCATATCAACCAAGAAGCA 831840 Query 80313 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 80372 |||| |||| | || || || ||||| || | || || ||||| ||||| || Sbjct 831839 AGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAA 831780 Query 80373 CCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCC-CATTGATGAA 80431 | || ||||| |||||||| ||||| | || || ||||| || || Sbjct 831779 GAACTTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGA- 831721 Query 80432 TTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTT 80491 | || || | |||||||| | |||||||||||| | || || ||||| | || | Sbjct 831720 TACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCT 831661 Query 80492 TCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 80551 | | | ||| ||| |||||||| || || ||||| || | |||| || || || | Sbjct 831660 TGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGT 831601 Query 80552 CGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT-GGTGATA 80610 | || | ||| | |||| | | ||||||| | | || || ||| || Sbjct 831600 CATAGACAATGGCAGAGTCCAACTCCTCCTTATGTCGCATGAC-GCACTCATAAGTCTCC 831542 Query 80611 CTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC-CTC 80669 |||| || || || || | || || || || || ||||||| | | | || ||| Sbjct 831541 TTTGAGATCATGGGCGACGGCCGGCCGTTCTTGGGGTTCACATAGTGGTAGAGGTCGCTC 831482 Query 80670 -CATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGG 80728 || || || || | || || || | |||||| || || || ||||| || | || Sbjct 831481 ACAACAGCGGAC--CATTGCTTCTTGGTCTGCTTGTGAAGGTTGGAGACGGCAATGCGGG 831424 Query 80729 CGGCTAAAATGGCATAATCTGGATG 80753 |||| | ||||||||| || ||||| Sbjct 831423 CGGCAAGAATGGCATAGTCGGGATG 831399 >seq4 Length=3324183 Score = 109 bits (120), Expect = 8e-19 Identities = 353/544 (65%), Gaps = 8/544 (1%) Strand=Plus/Plus Query 49974 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 50033 ||| ||||||||||| | | || || |||||||| || || || |||||||| || || Sbjct 1758198 GTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCGGGCATGAGACC 1758257 Query 50034 ACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGC 50093 |||||| || ||||| || || || || || | ||| |||||||| || || || || Sbjct 1758258 ACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATACCCTCAACGGC 1758317 Query 50094 GGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCA-CTTTTGAG 50149 || |||||||| || | || || | || | | || || ||||| | || | Sbjct 1758318 AGCGAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGGATCCATCGGATG-G 1758376 Query 50150 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 50209 |||| || ||||||||| | || || || || || ||||| || ||||| ||| || Sbjct 1758377 CCCAGTCAGCCTTCTTTCGGATGCAGGGAATAGTGTCAATGGCGTTGAAGAGGTAGGTTC 1758436 Query 50210 tttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 50269 | || || | || || ||||| | || || | || || ||||||| Sbjct 1758437 GCTGGGCGGGCTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAGTGAATGT 1758496 Query 50270 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTAC 50329 | || || ||||| || |||||||| || | |||||||| ||||| || || || Sbjct 1758497 TCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGGATCTGGACCTCGCCAC 1758556 Query 50330 AAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 50389 || || || | | || || || || || || || ||| || || || || | | Sbjct 1758557 TGAAACGCTCGACGAGGTTCTCGTTGACAATGCCATCTGAGGCAGCGAAGAAAGCAAGGA 1758616 Query 50390 CATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTCCAATCATTGATATCTT 50446 ||| | || | |||| | || | | || ||||| || | || ||| | Sbjct 1758617 TATGAGAGACGAAGAACTGCTCGTCAGCAGTCAGGCGGTTGTTCCAGTCGTGGAGATCCT 1758676 Query 50447 TAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCC 50506 | || | ||| | || || | ||||| || || ||||| ||||| || ||||| | || Sbjct 1758677 TGGAGAGATCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCCTTCTTGTACATTTGCC 1758736 Query 50507 AGAT 50510 | || Sbjct 1758737 AAAT 1758740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718265127850760