Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 2e-11 >seq3 Length=3549891 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | || ||||| |||| ||| ||||| || | ||||| ||||| Sbjct 3007135 CCACCACGAAGACGTAGAACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAA 3007076 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || || | || || | ||| ||||| ||||| || | |||||||||||||| || Sbjct 3007075 AGAGTTCGACCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCGGGAGGA 3007016 Query 43003 ACACCTTCTTTTTCGCTGATC-AACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | ||| || || || |||| ||| || || | ||| || ||| | |||||| Sbjct 3007015 ATACCCTCCTTGTCTTGGATCTTGCTC-TTCACATTATCAATGGTATCGGATGACTCGAC 3006957 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || ||||| || || || || ||||| |||||||| Sbjct 3006956 TTCCAGAGTAATGGTCTTTCCAGTAAGGGTCTTGACAAAGATTTGCAT 3006909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381367698991722