Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq4 241 2e-58 seq15 132 7e-26 >seq4 Length=3324183 Score = 241 bits (266), Expect = 2e-58 Identities = 573/849 (67%), Gaps = 33/849 (4%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 |||||| |||||||||| |||||| |||| ||||| ||||| | || ||| | ||||| Sbjct 1758740 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTC 1758681 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAG-AGTTTATA-- 125135 |||||||| || |||| ||| | | || |||||| |||| |||| |||| | Sbjct 1758680 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACTG---CTGA-CGAGCAGTTCTTCGT 1758625 Query 125136 -TCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGA 125193 || || || | || ||||| || | ||| ||||| || |||||||| || || || || Sbjct 1758624 CTCTCATATCCTTGCTTTCTTCGCTGCCTCAGATGGCATTGTCAACGAGAACCTCGTCGA 1758565 Query 125194 CACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGT-GCTTTTACGGATTCCAAATC 125252 || ||| | ||| | || || |||| |||| |||| ||||| ||||| ||| Sbjct 1758564 G-CGTTTCAGTGGCGAGGTCCAGATCCCCGAGGC-TCGTTGCTTCTACGGCTTCCAGATC 1758507 Query 125253 ATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGAT 125312 ||||| |||||| | ||||| || | ||||| || || |||| ||||| || Sbjct 1758506 ATGATGGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATCAAGGAG 1758447 Query 125313 CC-GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAA 125371 || || | ||| | ||||| ||||| || ||||| | || | || || || || Sbjct 1758446 CCCGCCCAGCGAACCTAC-CTCTTCAACGCCATTGACACTATTCCCTGCATCCGAAAGAA 1758388 Query 125372 GGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGT 125431 |||| | |||| || || |||||| | || | | || || | ||| | | || || Sbjct 1758387 GGCTGACTGGGCCATCCGATGGATCCAGGATAAGGACTCCTCCTTTGCCCAGCGTCTCGT 1758328 Query 125432 GGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCT 125491 || ||||| ||||| ||||| |||||||| ||| || || | ||||| ||||| Sbjct 1758327 TGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTGGCT 1758268 Query 125492 CAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGA 125551 ||||||||| || ||||||||||| ||||| | |||||| | || ||||| ||||| Sbjct 1758267 CAAGAAGCGTGGTCTCATGCCCGGTCTGACTTTCTCCAACGAGCTCATCTCTCGTGACGA 1758208 Query 125552 GGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAG 125611 ||| || ||| |||||||||| || || | ||| | | | | || | | Sbjct 1758207 GGGTCTTCACACTGACTTTGCCTGCCTCCT------CCACTCT---CACCTCAAGGGTCG 1758157 Query 125612 ATCCAGCGATGAAAAGGTCATCA--ACATTGTAACCGATGCCGTGAGGATAGAACAAGAG 125669 ||||| | | | | | ||| | || | || |||||||| | || || || ||| Sbjct 1758156 TGCCAGCAAGCAGATGAT--TCAGGATATCATTACTGATGCCGTCACCATTGAGCAGGAG 1758099 Query 125670 TTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAG 125729 || || || || | || || | | | |||||||||| | || ||| || Sbjct 1758098 TTCCTCACTGAGGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAG 1758039 Query 125730 TACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTAC 125786 ||||| ||||| || || |||||||| || || ||||| || ||| | ||| Sbjct 1758038 TACATTGAGTTCGTCGCTGATCGTCTCCTTGTCG---CTCTTGGCAACGAGAAGGTCTAC 1757982 Query 125787 AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTT 125846 || |||| || ||||| || |||||| | ||| || || | || ||||||||||| Sbjct 1757981 AAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTC 1757922 Query 125847 TTCGAGAAG 125855 ||||||||| Sbjct 1757921 TTCGAGAAG 1757913 >seq15 Length=1128247 Score = 132 bits (146), Expect = 7e-26 Identities = 305/450 (68%), Gaps = 12/450 (3%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||||||||| || || || || ||| | ||| ||||| | || ||||||||| | || Sbjct 832050 CAGGGCGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGCACTCTGAT 832109 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || | || | || || ||| || || |||| || ||| | ||| Sbjct 832110 GTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCGTGCCCGTGAC 832169 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT---CAACGACGGTGGC 97052 | || ||| || ||| | || ||| | ||||||||||| || || |||||| Sbjct 832170 CTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAAAAGAACGGTG-- 832227 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| || ||||||||| | || || || || |||| |||| || || ||| Sbjct 832228 -ACTGGACACTGATGTGCCCCAATGAGTGCCCTGGCCTCGCCGACTGCTACGGAGAGGAG 832286 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGAGACGAGTCGATGC 97171 || ||||| |||| |||||| | |||||| | || |||| | | | || Sbjct 832287 TTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAAGACCA-TTAAGGC 832345 Query 97172 ACGAGAA-CTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATT 97229 | |||| || ||| | |||| || ||| ||| ||| ||||| |||| || | ||| Sbjct 832346 TC-AGAAGCTCTGGTACGCCATTCTTGA-GGCCCAGACTGAGACCGGAAACCCATTCATG 832403 Query 97230 CTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGC 97289 |||||||||||| | || ||||| ||||||||| || | || |||||| | Sbjct 832404 CTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACCATCCGTAGT 832463 Query 97290 TCCAATCTGTGCACGGAAATTGTAGAGTAC 97319 ||||| || ||||| |||||| | |||||| Sbjct 832464 TCCAACCTTTGCACTGAAATTATCGAGTAC 832493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741055411334840