Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq6 100 4e-17 seq4 95.1 2e-15 >seq6 Length=3118486 Score = 100 bits (110), Expect = 4e-17 Identities = 85/102 (83%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| || | ||||| | ||||| |||||||| || ||||||||||| |||| Sbjct 1560750 CGCCAAGCGTCACCGAAAGATCT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCTA 1560808 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 |||| ||||| ||||| || ||||| ||||||||| | |||| Sbjct 1560809 TCCGACGTCTCGCTCGCCGAGGTGGTGTCAAGCGTATTTCTG 1560850 Score = 93.3 bits (102), Expect = 7e-15 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| |||| ||| |||||| ||||||| || ||| || | ||| | Sbjct 1560907 TGATCTACGAGGAGACCCGTGGTGTCCTGAAGACCTTCCTCGAGGGCGTCATTCGTGACG 1560966 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || || ||||||||||| || || ||||| ||||| || | ||| | ||||| | Sbjct 1560967 CCGTCACATACACCGAGCACGCCAAGCGCAAGACAGTCACATCTCTCGATGTTGTCTACG 1561026 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | |||| || |||||||| | |||| ||||| || ||||| Sbjct 1561027 CCCTGAAGCGACAAGGCCGCACCCTTTACGGTTTCGGTGGTTAA 1561070 >seq4 Length=3324183 Score = 95.1 bits (104), Expect = 2e-15 Identities = 83/101 (82%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||| | | ||||| |||||||| ||||| |||||||| ||||| Sbjct 1475934 GCCAAGCGTCACCGAAAGATTT-TGCGAGACAACATCCAGGGAATTACCAAGCCCGCTAT 1475992 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 || ||||| ||||||||||| || ||||||||| | |||| Sbjct 1475993 TCGACGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATTTCTG 1476033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074826048437