Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq15 201 1e-46 seq4 123 3e-23 >seq15 Length=1128247 Score = 201 bits (222), Expect = 1e-46 Identities = 714/1101 (65%), Gaps = 26/1101 (2%) Strand=Plus/Minus Query 62943 ATTATCTCAGTGCAAAGATT---ACTACACTTGATAGTTCCTAAATTTTGTTGATTACTC 62999 || || ||||||||||| || ||||| ||| || || | || | ||| || ||| Sbjct 832486 ATAATTTCAGTGCAAAGGTTGGAACTACG---GATGGTACCGAGGTTCTTTTGGTTGCTC 832430 Query 63000 TTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCT 63059 || ||| || |||||||| || || |||||||| | || || ||| |||| | || Sbjct 832429 TTGCGGTTGCAAGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCA 832370 Query 63060 ATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT-- 63116 | ||| || | ||||| | || ||||||| || | ||| | |||| | || Sbjct 832369 AGAATGGCGTACCAGA-GCTTCTGAGCCTTAATGGTC---TTGCGAC-CCTTGCCCTCCT 832315 Query 63117 --TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGAC 63174 ||||| | |||| |||||||| ||||| | | | | | ||||| | Sbjct 832314 TCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGC 832255 Query 63175 ATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGAT 63234 | |||| || ||||||| | ||| || |||| | | || || ||||| || |||| Sbjct 832254 ACTCATTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGAT 832195 Query 63235 CAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCT 63294 |||| |||||||| || | || || || | || | ||||| || || |||| Sbjct 832194 CAGGGATCCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCT 832135 Query 63295 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 63354 | ||||| |||||| | | | |||||| ||||| || || | ||| ||||| | | Sbjct 832134 TACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAG 832075 Query 63355 CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 63414 | || || || ||||| || ||||| || | || | ||| ||||| || | || | | Sbjct 832074 CACCGGGTCGCTTGTTGCCGCCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAA 832015 Query 63415 ACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCAC 63474 ||| |||| || ||| || ||| |||| |||||||||| ||| || ||| | |||| Sbjct 832014 GCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCAC 831955 Query 63475 GAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 63532 | ||| | | ||| | |||| || || || ||||| || ||||| | || || Sbjct 831954 GGATACGGTGCACATTCA--GACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGT 831897 Query 63533 TTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCT 63592 || | || || ||||| ||||| || || ||||| |||| | || | || || Sbjct 831896 CTTGAGAGTATCGTAGATTCCCTCAATACTGTCATCCTTCATATCAACCAAGAAGCAAGA 831837 Query 63593 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 63652 |||| |||| | || || || ||||| || | || || ||||| ||||| || | Sbjct 831836 TGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAA 831777 Query 63653 TTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTC 63711 || ||| | |||||||| ||||| | || || ||||| || || | | Sbjct 831776 CTTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGA-TAC 831718 Query 63712 CTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCA 63771 | || | |||||||| | |||||||||||| | || || ||||| || || || | Sbjct 831717 CAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCTTGA 831658 Query 63772 ACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 63831 | ||| ||| |||||||| || || ||||| || | |||| || || || || | Sbjct 831657 GGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCAT 831598 Query 63832 AAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTTG 63891 | | ||| | |||| | | ||||||| | | || || || ||| Sbjct 831597 AGACAATGGCAGAGTCCAACTCCTCCTTATGTCGCATGACGCACTCATAAGTCTCCTTTG 831538 Query 63892 AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC-CTC-CAT 63949 | || || || || | || || || || || ||||||| | | | || ||| || Sbjct 831537 AGATCATGGGCGACGGCCGGCCGTTCTTGGGGTTCACATAGTGGTAGAGGTCGCTCACAA 831478 Query 63950 CACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGC 64009 || || || | || || || | |||||| || || || ||||| || | |||||| Sbjct 831477 CAGCGGAC--CATTGCTTCTTGGTCTGCTTGTGAAGGTTGGAGACGGCAATGCGGGCGGC 831420 Query 64010 TAGAATGGCATAATCCGGATG 64030 ||||||||||| || ||||| Sbjct 831419 AAGAATGGCATAGTCGGGATG 831399 >seq4 Length=3324183 Score = 123 bits (136), Expect = 3e-23 Identities = 356/544 (65%), Gaps = 8/544 (1%) Strand=Plus/Plus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 ||| ||||||||||| | | || || |||||||| || || || |||||||| || || Sbjct 1758198 GTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCGGGCATGAGACC 1758257 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 |||||| || ||||| || || || ||||| | ||| |||||||| || || || || Sbjct 1758258 ACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATACCCTCAACGGC 1758317 Query 33438 AGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCA-CTTTTGAG 33493 ||| ||||||| || | || || | || | | || || ||||| | || | Sbjct 1758318 AGCGAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGGATCCATCGGATG-G 1758376 Query 33494 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 33553 |||| || ||||||||| | || || || || || ||||| || ||||| ||| || Sbjct 1758377 CCCAGTCAGCCTTCTTTCGGATGCAGGGAATAGTGTCAATGGCGTTGAAGAGGTAGGTTC 1758436 Query 33554 tttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 33613 | || || | || || ||||| | || || | || || ||||||| Sbjct 1758437 GCTGGGCGGGCTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAGTGAATGT 1758496 Query 33614 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTAC 33673 | || || ||||| || |||||||| || | |||||||| ||||| || || || Sbjct 1758497 TCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGGATCTGGACCTCGCCAC 1758556 Query 33674 AAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 33733 || || || | | || || || || || || || ||| || || || || | | Sbjct 1758557 TGAAACGCTCGACGAGGTTCTCGTTGACAATGCCATCTGAGGCAGCGAAGAAAGCAAGGA 1758616 Query 33734 CATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCATTGATATCTT 33790 ||| | || | | ||||| | || | | || ||||| || | || ||| | Sbjct 1758617 TATGAGAGACGAAGAACTGCTCGTCAGCAGTCAGGCGGTTGTTCCAGTCGTGGAGATCCT 1758676 Query 33791 TAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCC 33850 | || | ||| | || || | ||||| || || ||||| ||||| || ||||| | || Sbjct 1758677 TGGAGAGATCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCCTTCTTGTACATTTGCC 1758736 Query 33851 AGAT 33854 | || Sbjct 1758737 AAAT 1758740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622944015182440