Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq15 376 6e-99 >seq15 Length=1128247 Score = 376 bits (416), Expect = 6e-99 Identities = 1113/1687 (66%), Gaps = 52/1687 (3%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGAACGCCCGCA 363458 ||||| ||||| ||| ||||| ||| || | ||| | ||||| || ||||| || Sbjct 831633 AAGACTTTGGAGCGATCATACCTC-CTCAAGATTGACGGTAAGATTGTCGAGCGCCCTCA 831691 Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCG--CGATT 363516 ||| ||| | |||||||| || |||||||| || || || |||| || ||| | Sbjct 831692 GCACATGATCATGCGTGTGTCTGTTGGTATC---TG---GGGTGATGATATCGAGCGAGT 831745 Query 363517 ----GAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAA 363568 || ||||| || || |||| || || | |||||||| || | || || Sbjct 831746 CTTGGAGACATACAATCTGATGTCTA---GCAAGT-TCTTCACGCATGCTTCCCCCACGC 831801 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 | | |||||| || || | | | || || |||| |||||||| | | | ||||||| Sbjct 831802 TCTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGG 831861 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 | || || ||||| |||| || || || |||| ||||| | || ||||||| | Sbjct 831862 ATGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGG 831921 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747 | || || |||||| | | ||| | | ||||| || | | ||||| ||| Sbjct 831922 CTGGTGGTATTGGTCTGAATGTGCACCGTATCCGTGCTACTGG-CTCATACATCGCCGGT 831980 Query 363748 ACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || || ||| |||||||| | ||||| ||||||||||| || |||| ||||| | Sbjct 831981 ACCAACGG-TACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 832039 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 ||| ||||||||||| || ||||| || || ||||| || || ||||||||| Sbjct 832040 GTATGTCGACCAGGGCGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTG 832099 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926 || | ||| | || ||||| ||||| ||||| || ||| || || ||||| | || Sbjct 832100 GCACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCG 832159 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986 ||| ||||| || ||| ||| |||||| | |||| | ||| |||||||| || || Sbjct 832160 TGCCCGTGACCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGA--A 832217 Query 363987 AGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 | | | | | ||| |||| | ||||| | || || || || || |||| | Sbjct 832218 AAGAACGGTGACTGGACACTGATGTGCCCCAATGAGTGCCCTGGCCTCGCCGACTGCTAC 832277 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104 || || || | | ||||| ||||||||||| || |||||| |||| ||| ||||| Sbjct 832278 GGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAAGACC 832337 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 ||| || |||||||| |||| ||||| | || | |||| |||||| |||| || Sbjct 832338 ATTAAGGCTCAGAAGCTCTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCCA 832397 Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 | ||| | ||||| ||| | |||||||||||| |||||| || |||| ||||| | | Sbjct 832398 TTCATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACCA-T 832456 Query 364225 CAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283 | | || |||||| || || || ||||| || ||| || ||||||||| || || Sbjct 832457 CCGTAGTTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCCCCCGACGAGGTCGCTGT 832516 Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTACT---TTTGA 364337 || |||||||| || | | || || | || | | | |||| || | || Sbjct 832517 CTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCATCAACTACGATGAGGCTTGCTACGA 832576 Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGA 364397 | | || | | | | || | | || || | |||| || ||||| | ||||| Sbjct 832577 CTTCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATCATCGA 832636 Query 364398 CAAGAATTATTATCCAATTCCTGAAGCCGAGC-GTTCTAATATGCGTCATCGCCCGATTG 364456 ||| | || || ||| | || | || ||| ||||| || || || |||| Sbjct 832637 TGTGAACCACTA-CCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCCATTG 832695 Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGATTC 364514 |||||||||| |||||||| || || | ||| | ||||| ||| | || || || Sbjct 832696 GTCTTGGTGTTCAGGGCCTTGCCGATGCTTTCCT--TGCTCTGCGTATGCCCTTCGAGTC 832753 Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574 || || ||||||| || || ||| |||||||||| || || ||| || || | || Sbjct 832754 ACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTTGAGACCATTTATCACGCTGCCCTCAC 832813 Query 364575 TG-CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTC 364633 || || |||| | |||| || |||| ||||| || | |||| || || Sbjct 832814 TGCCTCCGTG-CAGCTGGCTAAGGAGGAGGGCCCCTACTCCACCTTCAAGGGTTCTCCCG 832872 Query 364634 TTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACT 364693 || |||| | |||||||||| | ||||| |||| ||| |||| || ||| ||| Sbjct 832873 CCTCTGAGGGTATCCTCCAGTTTGACATGTGGAACGTCAAGCCCTCTGACCTCTGGGACT 832932 Query 364694 GGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--TC-CCTCGTTACAG 364750 |||| || || || | || |||| || |||| || ||| || ||| || | Sbjct 832933 GGGAGACTCTTCGAGAGGAAGTCAAGACACACGGTATCCGTAACAGTCTGCTCCTT---G 832989 Query 364751 CGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGT 364810 | || ||||| || || |||| | ||||| || || ||||||||||||||||| || | Sbjct 832990 CTCCTATGCCTACTGCCAGTACTTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGCCCT 833049 Query 364811 TTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGT 364870 || |||| | || ||||| ||||| | || || || | ||| || || | Sbjct 833050 ACACCTCCAATATCTACCAGCGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACCCCT 833109 Query 364871 ACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCA 364930 || ||||||| ||| |||| || |||||| || ||||||||| |||| Sbjct 833110 GGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCATCA 833169 Query 364931 TCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTT 364990 | || | |||||||| | ||||||||||| | || | ||| | ||| | | | Sbjct 833170 TTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCCCTAT 833229 Query 364991 ACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTG 365050 | || || || ||||| ||||| ||| || | | ||||| || ||||| |||| Sbjct 833230 ATAAGACTGTTTGGGAGATTTCTCAGCGCCAGGTCGTCCAGATGGCTGCTGATCGAGGTG 833289 Query 365051 CTTTTAT 365057 | || || Sbjct 833290 CCTTCAT 833296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303346770019838