Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq15 215 7e-51 >seq15 Length=1128247 Score = 215 bits (238), Expect = 7e-51 Identities = 603/914 (66%), Gaps = 20/914 (2%) Strand=Plus/Minus Query 62798 ATTATCTCAGTGCAAAGATT---ACTACACTTGATGGTTCCTAAATTTTGTTGATTACTC 62854 || || ||||||||||| || ||||| |||||| || | || | ||| || ||| Sbjct 832486 ATAATTTCAGTGCAAAGGTTGGAACTACG---GATGGTACCGAGGTTCTTTTGGTTGCTC 832430 Query 62855 TTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCT 62914 || ||| || |||||||| || || |||||||| | || || ||| |||| | || Sbjct 832429 TTGCGGTTGCAAGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCA 832370 Query 62915 ATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCT--CTT 62971 | ||| || | ||||| | || ||||||| || | ||| | ||| | ||| Sbjct 832369 AGAATGGCGTACCAGA-GCTTCTGAGCCTTAATGGTC---TTGCGACCCTTGCCCTCCTT 832314 Query 62972 -TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACA 63030 ||||| | |||| |||||||| ||||| | | | | || ||||| || Sbjct 832313 CTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCA 832254 Query 63031 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 63090 |||| || ||||||| | ||| || |||| | | || || ||||| || ||||| Sbjct 832253 CTCATTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATC 832194 Query 63091 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 63150 ||| |||||||| || | || || || | || | ||||| || || ||||| Sbjct 832193 AGGGATCCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTT 832134 Query 63151 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAAC 63210 ||||| |||||| | | | |||||| ||||| || || | ||| ||||| | | | Sbjct 832133 ACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGC 832074 Query 63211 TCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAA 63270 || || || ||||| || ||||| || | || | ||| ||||| || | || | | Sbjct 832073 ACCGGGTCGCTTGTTGCCGCCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAG 832014 Query 63271 CATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACG 63330 ||| |||| || |||||| |||||||| ||||| || | ||| || ||| | ||||| Sbjct 832013 CATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACG 831954 Query 63331 AATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 63388 ||| | | ||| | |||| || || || ||||| || ||||| | || || Sbjct 831953 GATACGGTGCACATTCA--GACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTC 831896 Query 63389 TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTA 63448 || | ||||| ||||| ||||| ||||| |||||| |||| | || | || || Sbjct 831895 TTGAGAGTATCGTAGATTCCCTCAATACTGTCATCCTTCATATCAACCAAGAAGCAAGAT 831836 Query 63449 GACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCAT 63508 |||| |||| | || || || ||||| || | || || ||||| || || || | Sbjct 831835 GACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAAC 831776 Query 63509 TTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCC 63567 || ||| | |||||||| ||||| | || || ||||| || || | || Sbjct 831775 TTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGA-TACC 831717 Query 63568 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAA 63627 || | |||||||| | |||||||||||| | || || ||||| || || || | Sbjct 831716 AACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCTTGAG 831657 Query 63628 CAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 63687 | ||| ||| |||||||| || || ||||| || | |||| || || || || || Sbjct 831656 GAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATA 831597 Query 63688 AATAATAACCGAGT 63701 | ||| | |||| Sbjct 831596 GACAATGGCAGAGT 831583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633628760556400