Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq15 226 3e-54 seq4 174 2e-38 >seq15 Length=1128247 Score = 226 bits (250), Expect = 3e-54 Identities = 1096/1720 (64%), Gaps = 45/1720 (3%) Strand=Plus/Minus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 |||||||||| || || |||| || || ||||||||||| || |||||||| | Sbjct 833442 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTCTTGAGGC 833383 Query 113625 CCTGCTTCCAGGCATACATA-TGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATG 113683 | |||||||| | | || | ||||| | | |||| | || || | |||| Sbjct 833382 CAAGCTTCCAGCC-TGCAAAGTGCATACTCGTGATCTTGCCCATCGTGGGGTCCTTCATG 833324 Query 113684 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATC 113743 || ||||| |||||| ||||| |||||| || ||||| || ||||| | | Sbjct 833323 TGGATGTTCAGTGATTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCATCTGGACG 833264 Query 113744 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 113803 || | | || ||||| ||||| | || ||| ||| | ||| | ||||| Sbjct 833263 ACCTGGCGCTGAGAAATCTCCCAAACAGTCTTATATAGGGCCTTGACATCGGCAGGGATG 833204 Query 113804 TCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGAC 113863 | || || || ||||| ||| | | | ||| | | ||||||| | | ||| Sbjct 833203 TTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGAC 833144 Query 113864 CAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCC 113923 || ||||| || | || |||| | || |||||||| |||||||| Sbjct 833143 CACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCA 833084 Query 113924 GCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCC 113983 ||||| || | | | |||||||||| ||||| ||||| |||||||| ||||| ||| Sbjct 833083 GCGAGAACACGGCGCTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCC 833024 Query 113984 AAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCC 114043 | || |||| || ||| || ||||| || || | ||| || |||||||||| ||| Sbjct 833023 AGAATCTGGGAAGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACGGATACCG 832964 Query 114044 TTTTCCCTAATGCGTTC-CTTGAGG-GCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT 114101 | | | | | | | | || || | | |||||||| || | | || | | Sbjct 832963 TGTGTCTTGA--CTTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGAGGGCTTGACGT 832906 Query 114102 GCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATG 114161 |||||| ||||||||||||||||| | ||||| || || |||| || || ||| | Sbjct 832905 TCCACATGTCAAACTGGAGGATACCCTCAGAGGCGGGAGAACCCTTGAAGGTGGAGTAGG 832846 Query 114162 GGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCT 114218 ||||||| ||| |||| | ||||| || |||||| |||||||| || |||| Sbjct 832845 GGCCCTCCTCCTTAGCCAGCTGCACGGAG---GCAGTGAGGGCAGCGTGATAAATGGTCT 832789 Query 114219 CAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-A 114277 |||| || | || | | |||||| || || || | | || || | | Sbjct 832788 CAAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATACG-CAGAGCA 832730 Query 114278 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 114337 | || |||| || || || || ||||| || ||||| || || || | ||| ||| Sbjct 832729 AGGAAAGCATCGGCAAGGCCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTG 832670 Query 114338 TTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTG 114397 || ||||| || || || || ||| |||||| | | | || || || | Sbjct 832669 TTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATA 832610 Query 114398 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TG 114454 ||||||| ||| | || | ||| | | | || | || || ||| || | || Sbjct 832609 ACAACCTGACTGACCTTGTGCAACTTCTTGAAGTCGTA---GCAAGCCTCATCGTAGTTG 832553 Query 114455 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 114514 | | || || | | || || || || || |||| | ||| || || | Sbjct 832552 ATGAAGGAGGGCAGAGACAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCGGGGGCACAG 832493 Query 114515 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 114574 ||||| |||||||| || || | || ||||| ||||| || | ||||||||| || Sbjct 832492 TACTCGATAATTTCAGTGCAAAGGTTGGAACTACGGATGGTACCGAGGTTCTTTTGGTTG 832433 Query 114575 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 114634 ||| ||| || ||||||||||| |||||| |||| | || ||||| || |||| | Sbjct 832432 CTCTTGCGGTTGCAAGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCC 832373 Query 114635 TTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGC---CCCTC 114690 | ||||| || | ||||| | || | | || | ||| ||| | | ||||| Sbjct 832372 TCAAGAATGGCGTACCAGAGCTTCTGAGCCT----TAATGGTCTTGCGACCCTTGCCCTC 832317 Query 114691 CTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGG 114750 || |||||||||| ||| || || || ||||| || || | || | ||| || || Sbjct 832316 CTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGG 832257 Query 114751 TGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAG 114810 || || ||||| | || | ||| | ||| || ||||||||||||||||| || Sbjct 832256 GCACTCATTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAG 832197 Query 114811 GTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATT 114870 || |||||||| || || ||| || || || || | || || | || || || Sbjct 832196 ATCAGGGATCCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTT 832137 Query 114871 GAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGAT 114930 ||| | || | || || | || ||| | |||||| || || ||||| | || | Sbjct 832136 CTTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAA 832077 Query 114931 TG-AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATAC 114984 | || | ||| | | || |||||| ||||||| || ||| || || || Sbjct 832076 AGCACCGGGTCGCTT--GTTG-CCGCCCTGGTCGACATACCGAGCAGTGTTGTTGAAGAC 832020 Query 114985 GCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTA 115042 |||||||| |||| | ||||| ||| || || || || ||| || ||| | | Sbjct 832019 ACGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCC--A 831962 Query 115043 TTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCG 115102 | || | || | || | | || ||||||||| || ||| ||| ||||| || Sbjct 831961 GTAGCACGGATACGGTGCACATTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCA 831902 Query 115103 CACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAG 115162 || | ||||| | ||||||| || || || |||| |||| | | | | |||| Sbjct 831901 CAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCATCCTTCATATCAACCAAGAAG 831842 Query 115163 CAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATG 115222 || |||| ||| ||| || || || || |||||||| || || | || || || Sbjct 831841 CAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTG 831782 Query 115223 AACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGAC 115260 | | | |||| |||||| || ||| ||||||||||| Sbjct 831781 A--AGAACTTGCTAGACATCAGATTGTATGTCTCCAAGAC 831744 >seq4 Length=3324183 Score = 174 bits (192), Expect = 2e-38 Identities = 534/817 (65%), Gaps = 23/817 (3%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| |||| ||||||||||||||||| ||||| ||| | | | ||| |||||||| Sbjct 1757898 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCAT 1757957 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 125872 || || || ||||| | | || | | | |||| |||| ||| Sbjct 1757958 GAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGG 1758012 Query 125873 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932 |||||||| | |||| |||||||||||| ||| ||||||||||| |||| |||| Sbjct 1758013 AGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGG 1758072 Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992 ||| || || || || || |||| ||| |||||| ||||| || | ||| Sbjct 1758073 GCACAGGGAAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTAATGATA 1758132 Query 125993 GCGTGAATGGTGTCCACCC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 126049 | ||||| | | | | || | | ||| | || | || ||| || |||| Sbjct 1758133 TCCTGAATCATCTGCTTGCTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCA 1758189 Query 126050 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGC 126109 || || ||| |||||||||||||| |||||||| || || ||||| ||| || ||| Sbjct 1758190 AAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCGGGC 1758249 Query 126110 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCC 126169 |||||||| |||||||| | |||||| || | || | ||| ||||||||| ||| Sbjct 1758250 ATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATACCC 1758309 Query 126170 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAACCA 126228 || || ||||| |||| |||||||| ||||||||| | | | || | | | ||| Sbjct 1758310 TCAACGGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAG-GAGTCCTTATCCTGGATCCA 1758368 Query 126229 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 126288 || ||||| | ||||| || ||| || || | || | || || | ||||| Sbjct 1758369 TCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATAGTGTCAATGGCGTTGAAGAG 1758428 Query 126289 TTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCC 126348 | | | | || || |||||||| | || ||||| || || || ||| Sbjct 1758429 GTAGGTTCGCTGGGCGGGCTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCGGA 1758488 Query 126349 GTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTA 126407 ||| | | | ||| || | ||| | ||||||| | || || ||| ||||| | Sbjct 1758489 GTGAATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGGATCTGGA 1758547 Query 126408 CCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAA 126467 |||| | ||| | || ||||| ||||| ||||| || |||| || | Sbjct 1758548 CCTCGCCACTGAAACGCTCGACGAGGTTCTCGTTGACAATGCCATCTGAGGCAGCGAAGA 1758607 Query 126468 ACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGT 126524 | || ||||||| | ||| ||| || | | ||| || | |||||||||| Sbjct 1758608 AAGCAAGGATATGAGAGACGAAGAACTGCTCGTCAGCAGTCAGGCGGTTGTTCCAGTCGT 1758667 Query 126525 CAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||||||| |||||||| | |||||| |||||||| Sbjct 1758668 GGAGATCCTTGGAGAGATCAATCTCCTCAGCAGTCCA 1758704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350546029720