Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq15 188 9e-43 seq4 174 2e-38 >seq15 Length=1128247 Score = 188 bits (208), Expect = 9e-43 Identities = 1095/1726 (63%), Gaps = 57/1726 (3%) Strand=Plus/Minus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 |||||||||| || || |||| || || ||||||||||| || |||||||| | Sbjct 833442 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTCTTGAGGC 833383 Query 115586 CCTGCTTCCAGGCATACATA-TGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATG 115644 | |||||||| | | || | ||||| | | |||| | || || | |||| Sbjct 833382 CAAGCTTCCAGCC-TGCAAAGTGCATACTCGTGATCTTGCCCATCGTGGGGTCCTTCATG 833324 Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704 || ||||| |||||| ||||| |||||| || ||||| || ||||| | | Sbjct 833323 TGGATGTTCAGTGATTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCATCTGGACG 833264 Query 115705 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 115764 || | | || ||||| ||||| | || ||| ||| | ||| | ||||| Sbjct 833263 ACCTGGCGCTGAGAAATCTCCCAAACAGTCTTATATAGGGCCTTGACATCGGCAGGGATG 833204 Query 115765 TCCACGATATTTTGGATAGAGCCAC---CTGCCTTGACCATGAGATCCTTCATATCCTTT 115821 | || || || || || ||| | || ||| || | | ||||||| | | Sbjct 833203 TTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGA---TGCGGTTCTTCATAGCATCG 833147 Query 115822 GACCAGAGACCAATCTTCTTGAGATCCTCCA----CGAGGTGCTTATTGACAACAACAAA 115877 ||||| ||||| || | || |||| | | ||| | |||||||| || Sbjct 833146 GACCACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGG----TTGACAACCTGGAA 833091 Query 115878 CTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATT 115937 |||||| ||||| || | | | ||||| |||| ||||| ||||| |||||||| || Sbjct 833090 CTCACCAGCGAGAACACGGCGCTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTT 833031 Query 115938 GTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCG 115997 ||| |||| || |||| || ||| || ||||| || || | ||| || ||||| || Sbjct 833030 GTTGCCCAGAATCTGGGAAGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACG 832971 Query 115998 GAGACCCACCCCCCTAATGCGTTC-CTTGAGG-GCGTCCCAGTCGTAGTTGAGCTTTGTC 116055 || ||| | | | | | | || || | | |||||||| || | | | Sbjct 832970 GATACCGTGTGTCTTGA--CTTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGAGGGC 832913 Query 116056 TCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTC 116115 | | | |||||| ||||||||||||||||| | || || || || |||| || || Sbjct 832912 TTGACGTTCCACATGTCAAACTGGAGGATACCCTCAGAGGCGGGAGAACCCTTGAAGGTG 832853 Query 116116 TCATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATAC 116172 || |||||||| ||| |||| | ||||| || |||||| |||||||| Sbjct 832852 GAGTAGGGGCCCTCCTCCTTAGCCAGCTGCACGGAG---GCAGTGAGGGCAGCGTGATAA 832796 Query 116173 ATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGG 116232 || |||||||| || | || | | |||||| || || || | | ||| Sbjct 832795 ATGGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATACG- 832737 Query 116233 CACAA-AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 116291 || | || || |||| || || || || ||||| || ||||| || || || | ||| Sbjct 832736 CAGAGCAAGGAAAGCATCGGCAAGGCCCTGAACACCAAGACCAATGGGTCGGTGGCGCAT 832677 Query 116292 ATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 116351 ||| || ||||| || || || || ||| |||||| | | | || || || Sbjct 832676 GTTACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTT 832617 Query 116352 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 116411 | ||||||| ||| | || | ||| | | | || | || || ||| || Sbjct 832616 GCGAATAACAACCTGACTGACCTTGTGCAACTTCTTGAAGTCGTA---GCAAGCCTCATC 832560 Query 116412 AT---TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 116468 | ||| | || || | | || || || || || |||| | ||| || Sbjct 832559 GTAGTTGATGAAGGAGGGCAGAGACAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCGGG 832500 Query 116469 ATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTT 116528 || |||||| |||||||| || || | || ||||| ||||| || | |||||| Sbjct 832499 GGCACAGTACTCGATAATTTCAGTGCAAAGGTTGGAACTACGGATGGTACCGAGGTTCTT 832440 Query 116529 TTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGT 116588 ||| || ||| ||| || ||||||||||||||||| |||| | || ||||| || Sbjct 832439 TTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGT 832380 Query 116589 TTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGC- 116646 |||| || ||||| || | ||| | | || | | || | ||| ||| | | Sbjct 832379 CTGGGCCTCAAGAATGGCGTACCAGAGCTTCTGAGCCT----TAATGGTCTTGCGACCCT 832324 Query 116647 --CCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAG 116703 ||||||| |||||||||| ||| || ||||| ||||| || || ||| || | | Sbjct 832323 TGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTC-TCCGTAGCAGTCGGCG 832265 Query 116704 AGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTC 116763 || || || || || || || | || | ||| | ||| || ||||| |||||| Sbjct 832264 AGGCCAGGGCACTCATTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTC 832205 Query 116764 ATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCC 116823 ||||| || || |||||||| || || ||| || || || || | || || | Sbjct 832204 ATGAAAAGATCAGGGATCCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTA 832145 Query 116824 CCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTAC 116883 || || || ||| | || | || || | || ||| | |||||| || || ||||| Sbjct 832144 CCGTGGTTCTTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAG 832085 Query 116884 ACCGCGATTG-ACC-CCTTGC--GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTT 116939 | || | | ||| | || | | || |||||| ||||||| || || ||| Sbjct 832084 ATGGCAAAAGCACCGGGTCGCTTGTTG-CCGCCCTGGTCGACATACCGAGCAGTGTTGTT 832026 Query 116940 AAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGA 116997 || || |||||||| |||| | ||||| ||| || || || || ||| || || Sbjct 832025 GAAGACACGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGA 831966 Query 116998 GACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATT 117057 | | | || | || | ||| | | || ||||||||| || ||| ||| ||||| Sbjct 831965 GCC--AGTAGCACGGATACGGTGCACATTCAGACCAATACCACCAGCCATCTTGGAGATC 831908 Query 117058 TGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATG 117117 || || | ||||| | ||||||| || || || |||| |||| | | | Sbjct 831907 ATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCATCCTTCATATCAACC 831848 Query 117118 AGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCG 117177 | |||||| |||| ||| ||| || || || || |||||||| || || | || Sbjct 831847 AAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCA 831788 Query 117178 TGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGAC 117221 || ||| | | |||| |||||| || ||| ||||||||||| Sbjct 831787 TGCGTGA--AGAACTTGCTAGACATCAGATTGTATGTCTCCAAGAC 831744 >seq4 Length=3324183 Score = 174 bits (192), Expect = 2e-38 Identities = 532/816 (65%), Gaps = 21/816 (3%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| | || ||||||||||||||||| ||||| || | ||| ||| |||||||| Sbjct 1757898 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCAT 1757957 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 127345 || || || ||||| | | || | | | |||| |||| ||| Sbjct 1757958 GAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGG 1758012 Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 127405 |||||||| | |||| |||||||||||| ||| ||||||||||| |||| |||| Sbjct 1758013 AGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGG 1758072 Query 127406 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465 ||| || || || || || |||| ||| ||||||| || || || | ||| Sbjct 1758073 GCACAGGGAAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTAATGATA 1758132 Query 127466 GCGTGAATAGTGTCCACCC---CAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCA 127522 | ||||| | | | | || | | ||| | || | || ||| || ||| Sbjct 1758133 TCCTGAATCATCTGCTTGCTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CAG-GCA 1758189 Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582 || || ||| |||||||||||||| |||||||| || || ||||| |||||| ||| Sbjct 1758190 AAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCGGGC 1758249 Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642 |||||||| |||||||| | |||||| || | || | ||| ||||||||| ||| Sbjct 1758250 ATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATACCC 1758309 Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCAC 127702 || || ||||| |||| ||||||| |||||||||| | ||| | | ||| Sbjct 1758310 TCAACGGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGGATCCAT 1758369 Query 127703 TTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGT 127762 || ||||| | ||||| || ||| || || | || | || || | ||||| Sbjct 1758370 CGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATAGTGTCAATGGCGTTGAAGAGG 1758429 Query 127763 TCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCG 127822 | | | | || || |||||||| | || ||||| || || || ||| | Sbjct 1758430 TAGGTTCGCTGGGCGGGCTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAG 1758489 Query 127823 TGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTAC 127881 || | | | ||| || | ||| | ||||||| | || || ||| ||||| || Sbjct 1758490 TGAATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGGATCTGGAC 1758548 Query 127882 CTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAA 127941 ||| | ||| | || ||||| ||||| ||||| || |||| || || Sbjct 1758549 CTCGCCACTGAAACGCTCGACGAGGTTCTCGTTGACAATGCCATCTGAGGCAGCGAAGAA 1758608 Query 127942 CGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTC 127998 || ||||||| | ||| ||| || | | ||| || | |||||||||| Sbjct 1758609 AGCAAGGATATGAGAGACGAAGAACTGCTCGTCAGCAGTCAGGCGGTTGTTCCAGTCGTG 1758668 Query 127999 GAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||||||||| |||||||| | |||||| |||||||| Sbjct 1758669 GAGATCCTTGGAGAGATCAATCTCCTCAGCAGTCCA 1758704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504063444440