Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq3 134 2e-26 seq4 129 7e-25 seq7 111 2e-19 >seq3 Length=3549891 Score = 134 bits (148), Expect = 2e-26 Identities = 147/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||| || || |||||||| |||| || ||||||||||||||||| Sbjct 3006590 CTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 3006531 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||||||| |||||||||| || | | |||||||||| ||||| ||||| ||| Sbjct 3006530 AATCAAGCGTTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGAATCTTGGACTTGA-CGT 3006472 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | |||||||| ||||| ||||| || || | Sbjct 3006471 TGTCGATAGTGTCGGATGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGA 3006412 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 3006411 CGAAGATCTGCAT 3006399 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||||||||| ||||| || | || || || |||||||| || || Sbjct 3007099 TCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGACCATCCTCAAGTTGCTTGCCAGCAAAG 3007040 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||| || |||| || | | ||||||||| |||||| |||| | | Sbjct 3007039 ATGAGTCGCTGTTGATCGGGAGGAATACCCTCCTTGTCTTGGATCTTGCTCTTCACATTA 3006980 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | || ||| || || || |||| || ||||| || || || || || || ||| Sbjct 3006979 TCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCTTTCCAGTAAGGGTCTTGACA 3006920 Query 46583 AAGATTTGCAT 46593 ||||||||||| Sbjct 3006919 AAGATTTGCAT 3006909 Score = 89.7 bits (98), Expect = 6e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| ||||| || || |||||||||| ||||| || |||| ||| Sbjct 3006889 ACGAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCAAGAGTTCGGCCGTCTTCG 3006830 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || ||||| || || || |||| |||||||||||| | || | | |||||||||| Sbjct 3006829 AGTTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGA 3006770 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 |||||| ||| | | | | || ||| || || || || | |||||||| ||| Sbjct 3006769 ATCTTCGACTTAACATTGTCGATGGTATCGGATGACTCGACCTCAAGGGTGATGGTCTTG 3006710 Query 46565 CCCGTCAGCGTTTTAAC 46581 || || || || || || Sbjct 3006709 CCAGTGAGGGTCTTGAC 3006693 >seq4 Length=3324183 Score = 129 bits (142), Expect = 7e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||| || ||||| | || |||||||||||||| ||||| Sbjct 2716513 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAA 2716572 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||||| || | || |||||||||| |||||| ||||| ||| Sbjct 2716573 GATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 2716631 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || ||||| || | ||||| || || ||||| || || || | Sbjct 2716632 TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGA 2716691 Query 46581 CAAAGATTTGCATTTTGC 46598 | || || ||||| |||| Sbjct 2716692 CGAAAATCTGCATCTTGC 2716709 >seq7 Length=2761656 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||||| ||||| || | || ||||||||||| || ||||| | Sbjct 1020316 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGA 1020257 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| ||||| ||||| | || | || |||||||||| |||||| ||||| | Sbjct 1020256 TCAGTCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1020197 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | ||||| || || || || | |||||||| ||||||||||| || || || | Sbjct 1020196 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 1020137 Query 46584 A 46584 | Sbjct 1020136 A 1020136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565235510218680