Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq15 190 3e-43 seq4 143 3e-29 >seq15 Length=1128247 Score = 190 bits (210), Expect = 3e-43 Identities = 1126/1785 (63%), Gaps = 45/1785 (3%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| ||||| ||||||| || | | |||||| || || ||||| || || Sbjct 831686 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 831745 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATC---CACGCAACACCAACCCT 111727 |||||||||||| | |||||| | | | |||| || || || | || || || Sbjct 831746 CTTGGAGACATACAATCTGATGTC---TAGCAAGTTCTTCACGCATGCTTCCCCCACGCT 831802 Query 111728 CTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGA 111787 |||||| || || || || |||||| |||| ||| ||| | ||| | ||||| Sbjct 831803 CTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGA 831862 Query 111788 GGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGC 111847 || || | || || |||| ||||||| |||||| ||||| ||| ||| Sbjct 831863 TGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGC 831922 Query 111848 TGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGT 111905 ||||||||| || || | | || | || | || | | ||| || | | ||| Sbjct 831923 TGGTGGTATTGGTCTGAATGTGCACCGTATCCGTGCTACT--GGCTCATACATCGCCGGT 831980 Query 111906 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 111965 || || ||| ||| ||||| || |||| |||||||| || || ||| ||| || || Sbjct 831981 ACCAACGGTACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGG 832040 Query 111966 TATGTAAACCAAGCTGGGCGTCG-CAAGGGATC------TATCGCAGTCTATCTTGAGCC 112018 ||||| |||| ||||| | |||| || | | | || |||| || ||||| Sbjct 832041 TATGTCGACCA----GGGCGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCC 832096 Query 112019 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGC 112078 |||||| | ||| || | ||||||||||| | ||| ||||| ||| | ||||||| Sbjct 832097 TTGGCACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGT 832156 Query 112079 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 112138 || ||| || || ||| || || ||||| || ||||| ||||||||| | ||||| Sbjct 832157 CCGTGCCCGTGACCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGA 832216 Query 112139 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGT 112198 ||| || | ||| | || | || || | || || || ||| |||| | Sbjct 832217 AAAGAACGGTGACTGGACACTGATGTGCCCCAATGAGTGCCCTGGCCTCGCCGACTGCTA 832276 Query 112199 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--G 112256 || |||||||| || || || ||| ||||||||| |||| | | | | | | || | Sbjct 832277 CGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGA-GAAGGAGGGCAAGGGTC-GCAAG 832334 Query 112257 ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 112315 || | ||| | || | | ||| | || ||||| || | || || ||||| || | Sbjct 832335 ACCATTAAGGCT-CAGAAGCTCTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAA 832393 Query 112316 ACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 112375 |||| ||||| ||||| || || || |||| ||||| || |||||||| | ||| Sbjct 832394 CCCATTCATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTAC 832453 Query 112376 GATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 112435 ||| ||||||||||| || || ||||| | || | | | || ||| || Sbjct 832454 CATCCGTAGTTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCCCCCGACGAGGTCGC 832513 Query 112436 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT 112495 ||| || ||||| || || | |||| ||| | | || || | || | Sbjct 832514 TGTCTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCAT-----CAACTACGATGAGGCT 832568 Query 112496 T-----GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGA 112550 | || | | || | ||| | || | | ||| | ||||| |||| Sbjct 832569 TGCTACGACTTCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAG 832628 Query 112551 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 112610 | || ||| || ||||| || || ||||| || ||| ||| | ||||| Sbjct 832629 ATCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGA 832688 Query 112611 CCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATT 112669 || |||||||| ||||| || || || || |||| ||| || || || || | || Sbjct 832689 CCCATTGGTCTTGGTGTTCAGGGCCTTGCCGATGCTTTCCTTGCTCTG-CGTATGCCCTT 832747 Query 112670 TGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGC 112729 || || ||| || || |||| || || |||||||| || |||||||| || Sbjct 832748 CGAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTTGAGACCATTTATCACGCTGC 832807 Query 112730 TCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789 || || | || |||| ||| || || || || ||||| ||||||| Sbjct 832808 CCTCACTGCCTCCGTGCAGCTGGCTAAGGAGGAGGGCCCCTACTCCACCTTCAAGGGTTC 832867 Query 112790 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTA 112849 ||| || || | || | || || ||||| |||||| | | || || | || Sbjct 832868 TCCCGCCTCTGAGGGTATCCTCCAGTTTGACATGTGGAACGTCAAGCCCTCTGACCTCTG 832927 Query 112850 CGACTGGGACGCTC-TCAAG-GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 112907 |||||||| ||| || || | | | ||||| | ||| | ||||||||||| | Sbjct 832928 GGACTGGGAGACTCTTCGAGAGGAAG--TCAAGACACACGGTATCCGTAACAGTCTGCTC 832985 Query 112908 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 112967 | || || ||||| || ||| || | || || |||| || || || ||||| || Sbjct 832986 CTTGCTCCTATGCCTACTGCCAGTACTTCCCAGATTCTGGGCAACAACGAGTGCTTCGAG 833045 Query 112968 CCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 113027 |||||||| | || ||||| | | | | ||||| || ||||| | |||||||| Sbjct 833046 CCCTACACCTCCAATATCTACCAGCGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAAC 833105 Query 113028 AAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTC 113087 || | | ||||| || || ||||| |||||| | | ||||||| | | | Sbjct 833106 CCCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGC 833165 Query 113088 ATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAG 113147 || | | | |||||||||||| || ||| | || || | || | ||| Sbjct 833166 ATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCC 833225 Query 113148 TTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGT 113207 | || || |||||||| || | | ||| | | ||||| || ||||| Sbjct 833226 CTATATAAGACTGTTTGGGAGATTTCTCAGCGCCAGGTCGTCCAGATGGCTGCTGATCGA 833285 Query 113208 GGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCC 113267 ||| |||||||||||| ||| |||| | |||| | || |||||| | Sbjct 833286 GGTGCCTTCATTGATCAGTCCCAATCACTGAACATCCACATGAAGGACCCCACGATGGGC 833345 Query 113268 AAGCTCTCTTCTATGCACATGTACA-GTTGGAAGAAGGGTCTCAAAACGGGGATGTATTA 113326 ||| || | ||||||| | | || | |||||| || ||||| || || ||||| || Sbjct 833346 AAGATCACGAGTATGCAC-TTTGCAGGCTGGAAGCTTGGCCTCAAGACCGGCATGTACTA 833404 Query 113327 CCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGA 113371 ||| || | |||| || || |||||||||| | |||| Sbjct 833405 CCTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCACTGTTGA 833449 >seq4 Length=3324183 Score = 143 bits (158), Expect = 3e-29 Identities = 179/243 (74%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149 ||||| | ||||| | || |||| || || | |||||| || || ||||| || Sbjct 1758428 CTCTTCAACGCCATTGACACTATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGA 1758369 Query 102150 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 102208 ||| | | | || | | | | ||||||| |||| ||| | || || || ||||| Sbjct 1758368 TGGATCCAGGATAAGGACTCCT-CCTTTGCCCAGCGTCTCGTTGCCTTCGCTGCCGTTGA 1758310 Query 102209 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 102268 ||||||||||||| |||| ||||| | |||| | |||||||||||||| |||||||| Sbjct 1758309 GGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCAT 1758250 Query 102269 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 102328 ||| ||||| |||||||||||||| ||||||||||||||||| || ||| || || Sbjct 1758249 GCCCGGTCTGACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTT 1758190 Query 102329 TGC 102331 ||| Sbjct 1758189 TGC 1758187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620739226454480