Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq15 214 2e-50 seq4 107 2e-18 seq1 89.7 6e-13 >seq15 Length=1128247 Score = 214 bits (236), Expect = 2e-50 Identities = 1139/1785 (64%), Gaps = 61/1785 (3%) Strand=Plus/Minus Query 105551 TCAAGACTGAACTGAATTGGGCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTC 105610 |||| | |||||||||| || || |||| | || || |||||||| |||||| Sbjct 833449 TCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTC 833390 Query 105611 TTGAGTCCTTGTTTCCACGCGTACATA-TGCATAGAAGAGAGCTTGGACATCGTTGGACT 105669 ||||| || | ||||| || | || | |||||| | || |||| |||||| || Sbjct 833389 TTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATACTCGTGATCTTGCCCATCGTGGGGTC 833331 Query 105670 TTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCAT 105729 | |||| | |||| ||| ||| ||||||||| ||| || | || ||||| Sbjct 833330 CTTCATGTGGATGTTCAGTGATTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCAT 833271 Query 105730 ATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATC 105789 | | ||| | | || ||||| || || || || ||||| ||| | Sbjct 833270 CTGGACGACCTGGCGCTGAGAAATCTCCCAAACAGTCTTATATAGGGCCTTGACATCGGC 833211 Query 105790 TGGGATATCTGAGATATTTTGAATTGAACC---CCCCGCCTTGACCATGAGATCCTTCAT 105846 ||||| | | || || ||||| ||||| | | || ||| || | | |||||| Sbjct 833210 AGGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGA---TGCGGTTCTTCAT 833154 Query 105847 ATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATCAC 105906 | | | |||||| ||||| || | || || |||| || |||||||| | Sbjct 833153 AGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTG 833094 Query 105907 AAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTC 105966 ||||| || ||||| | | | | ||||| || | |||||||| || ||||| || Sbjct 833093 GAACTCACCAGCGAGAACACGGCGCTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTC 833034 Query 105967 ATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTT 106026 || || |||| || || | || ||| || ||||| || || | | |||||||| Sbjct 833033 GTTGTTGCCCAGAATCTGGGAAGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTT 832974 Query 106027 ACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACA---TCCCAGTCGTAGTTG--AGC 106081 ||| | ||| | | ||||| ||||| ||| | |||||||| || | || Sbjct 832973 ACGGATACCGTGTGTCTTGAC---TTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGA 832917 Query 106082 TTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCA 106141 || || || |||| |||| ||||| || || | || | || | ||||||||||| Sbjct 832916 G-GGCTTGACGTTCC-ACATGTCAAACTGGAGGATACCCTCAGAGGCGGGAGAACCCTTG 832859 Query 106142 AATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCGTG 106200 || || |||| || | | | ||||| | ||| | || |||| ||||| Sbjct 832858 AAGGTGGAGTAGGGGCCCTCCTCCTTAGCCAGCTGCACGGAG-GCAGTGAGGGCAGCGTG 832800 Query 106201 ATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTA 106260 ||| ||||| |||||||| | || | ||| || || ||| || || | | | Sbjct 832799 ATAAATGGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGG-GCA 832741 Query 106261 GCGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTC 106319 ||| | || || |||| || || || |||||||| | |||||| |||| ||| | Sbjct 832740 TACGCAGAGCAAGGAAAGCATCGGCAAGGCCCTGAACACCAAGACCAATGGGTCGGTGGC 832681 Query 106320 GCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTA 106379 |||| ||| || || || || || || || || || |||| ||| | Sbjct 832680 GCATGTTACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTCA 832621 Query 106380 GATTTTTGGTAACAATCTTTGTGATTTCATG-AAGTTTTTCATAATCAAAAGTGCGAGTC 106438 | || |||||| || ||| | || || || || | | || | || || | Sbjct 832620 GGTTGCGAATAACAACCTGACTGACCTTGTGCAACTTCTTGA-AGTCGTA---GCAAGCC 832565 Query 106439 TCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCA 106495 || || | ||| | || || | | || || | ||||| ||||| ||| Sbjct 832564 TCATCGTAGTTGATGAAGGAGGGCAGAGACAGAGAGGCAAGGTTGCAGACAGCGACCTCG 832505 Query 106496 TCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAA 106555 || | |||||| | |||||| || || | ||||||||| || || || | Sbjct 832504 TCGGGGGCACAGTACTCGATAATTTCAGTGCAAAGGTTGGAACTACGGATGGTACCGAGG 832445 Query 106556 TTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTC 106615 ||||||||||| ||||| |||||| |||||||||||||||||| | || | || ||| Sbjct 832444 TTCTTTTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATGAATGGGTTTCCGGTC 832385 Query 106616 TCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTG-G 106673 || ||||| | || ||||| || | ||| | | || | | || ||||| ||| | Sbjct 832384 TCAGTCTGGGCCTCAAGAATGGCGTACCAGAGCTTCTGAGCCT----TAATGGTCTTGCG 832329 Query 106674 CCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTC 106731 || | |||||| |||||||||| ||| || || || |||||||| || ||| Sbjct 832328 ACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTC 832269 Query 106732 GGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCG 106791 || ||| || || || | || || | || | ||| | ||| || ||||| || Sbjct 832268 GGCGAGGCCAGGGCACTCATTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACG 832209 Query 106792 CTTCATGAAAAGGTCTGGAATCCACAGGG-ATGAAAAGAGATCTC-TACACCGAGCCTCT 106849 |||||||||||| || || ||||| |||| | | ||| || || | ||| || |||| Sbjct 832208 CTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAA-AGGTCACGGGCACGGA-CCTCC 832151 Query 106850 TCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCA 106909 || | ||| ||||| || | ||||||||||| | || ||| | |||||| ||||| Sbjct 832150 TCCTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCG 832091 Query 106910 AGATAGACTGCGATA------GATCCCTT-TCGACGCCCAGCTTGATTTACATAGCGCGC 106962 || |||| || | | | || ||| | | ||||| || | ||||| || || Sbjct 832090 AGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCGCCC----TGGTCGACATACCGAGC 832035 Query 106963 TGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCC 107021 ||| ||| || || |||||||| |||| || ||||| ||| ||| || || || | Sbjct 832034 AGTGTTGTTGAAGACACGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGC 831975 Query 107022 GA-ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCAC 107080 || || ||| | | || | | | || | | || |||||||| |||||| | Sbjct 831974 GATGTATGAG--CCAGTAGCACGGATACGGTGCACATTCAGACCAATACCACCAGCCATC 831917 Query 107081 TTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTG 107140 || ||||| ||||| | | ||||| | ||||| || | || ||| ||||| Sbjct 831916 TTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCATCCTTC 831857 Query 107141 TTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTT 107200 | | | | ||||||| |||| || || || || || ||||||||||| || Sbjct 831856 ATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTG 831797 Query 107201 GGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAAT 107258 || | || || ||| | | |||| |||||| | ||||||||||||||| | Sbjct 831796 GGGGAAGCATGCGTGA--AGAACTTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCT 831739 Query 107259 CAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 | || || || || ||| || | | ||||||||| | ||||| Sbjct 831738 CGATATCATCACCCCAGATACCAACAGACACACGCATGATCATGT 831694 >seq4 Length=3324183 Score = 107 bits (118), Expect = 2e-18 Identities = 329/503 (65%), Gaps = 18/503 (4%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| |||| |||||||| |||||||||||||| || ||||| ||||| ||||| Sbjct 1757899 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 1757958 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100 ||||| || || || | || || | | | | || |||| |||| Sbjct 1757959 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGGA 1758013 Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160 ||||||| | || |||||||||||| ||| ||||||||||| |||| ||| Sbjct 1758014 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGG 1758073 Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220 ||| || || || || || |||| | | |||||| || || || | | ||| Sbjct 1758074 CACAGGGAAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTAATGATAT 1758133 Query 117221 CGTGGATAGTTTCGGTAGTGGGTCTA---TTACGCAAAGTCTTGAAGAGCTCCACGGCAA 117277 | || || | | | ||| | | || | || | || ||| || ||||| Sbjct 1758134 CCTGAATCATCTGCTTGCTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCAA 1758190 Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337 | || ||| |||||||| || || || || || || || ||||| || || |||| Sbjct 1758191 AGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCGGGCA 1758250 Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCT 117397 ||||||| |||||||| | ||| | |||| | ||| | || |||||||||||||| Sbjct 1758251 TGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATACCCT 1758310 Query 117398 CCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCAT 117456 | || || || |||| || |||| ||| |||||| ||| | || | | | |||| Sbjct 1758311 CAACGGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAG-GAGTCCTTATCCTGGATCCAT 1758369 Query 117457 TTCATTGCCCATTTCGCCTTCTT 117479 || ||||| | |||||||| Sbjct 1758370 CGGATGGCCCAGTCAGCCTTCTT 1758392 >seq1 Length=5319023 Score = 89.7 bits (98), Expect = 6e-13 Identities = 139/198 (70%), Gaps = 3/198 (2%) Strand=Plus/Minus Query 155045 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 155104 |||| || |||| || ||||| ||||||||| |||||| ||| | || || | Sbjct 2430239 ATGGACGCATTGCCCCTCGATCGGGTCTCGCTTCCAAGCATTTCATTGACACAGGCGCTG 2430180 Query 155105 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 155164 |||| || ||| |||| ||| ||| | ||||| ||| | || ||||| || || Sbjct 2430179 GTGTCATCGATGCCGATTATCGCGGTCAGGTCAAGGTCCTGCTTTTCAACCATAATGAAT 2430120 Query 155165 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGCTGTGAAA 155224 ||||||||||| ||| | || || ||||| || |||||||| || |||||| | | Sbjct 2430119 CCGACTTTGAGGTGAAGGAGGGCGACCGCATTGCTCAACTTGTTCTGGAGCGCATCTACA 2430060 Query 155225 CACCCGA---TGTGGAGG 155239 | ||||| |||||||| Sbjct 2430059 CCCCCGAGGTTGTGGAGG 2430042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977783723160