Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq3 132 6e-26 >seq3 Length=3549891 Score = 132 bits (146), Expect = 6e-26 Identities = 344/516 (67%), Gaps = 15/516 (3%) Strand=Plus/Minus Query 154598 TGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTA 154657 ||| ||||| || | ||| ||| | | || || ||| | || | |||||||||| Sbjct 1484591 TGAGATCACTGGTATGGATGCTACCACTCTTCAGCCCAACTCTGGTGCTCAGGGTGAGTT 1484532 Query 154658 TGCAGGACTGTTAGCA--ATCCAAGCATACCATCAAGGATCAGGA-GATGATAAAAGAAA 154714 ||| || || | || ||| | || ||||| | ||| || || | || || |||| Sbjct 1484531 TGCTGGTCT--TCGCTGTATCAAGGCCTACCA-CGAGGCTCGTGATGGAGACAAGCGAAA 1484475 Query 154715 TGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGG 154774 || ||| | || || | || || || || || || |||||| ||||| |||||| || Sbjct 1484474 GGTCTGTCTTATCCCTGTTTCTGCTCACGGTACCAACCCTGCTTCTGCTGCCATGGCTGG 1484415 Query 154775 GATGAAAGTTGTAGGTGTCAAGTGTGATG--ATGA-TGGTAACATAGACATCAAAGATCT 154831 ||||| ||||| |||||||||||| | | || ||||||| | || ||| ||||||| Sbjct 1484414 TATGAAGGTTGTTACTGTCAAGTGTGACGGCAAGACTGGTAACCTGGATATCGAAGATCT 1484355 Query 154832 AGAG---AAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACCC 154888 || ||| || || | | | ||| || | ||| ||| |||| || || Sbjct 1484354 CAAGGCCAAGTGTGC---CAAGCACGCTGATGAGCTTGCTGCTATCATGGTTACTTATCC 1484298 Query 154889 ATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACAA 154948 ||||| ||||| || || || | |||| || | ||| | | || || || | Sbjct 1484297 CTCTACTTTCGGTGTCTTCGAGCCTGAGATTAAGCAAGTCTGTGATCTTGTCCACGAGCA 1484238 Query 154949 TGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACC 155008 ||| |||| || || | || || || || | || || ||| | || || | || Sbjct 1484237 TGGCGGTCTTGTCTACATGGACGGTGCCAACATGAACGCTCAGATTGGTCTCTGCAGCCC 1484178 Query 155009 ATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACA 155068 |||| |||||| ||||| |||||||| ||| | || || || ||||||||||| || Sbjct 1484177 CGGTGACATTGGTGCTGATGTCTGTCATCTCAACCTCCACAAGACCTTCTGTATTCCCCA 1484118 Query 155069 TGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 || ||||| ||||| || || |||||||| | ||| Sbjct 1484117 CGGCGGTGGTGGTCCCGGTGTTGGTCCTATCGCTGT 1484082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579209838774560