Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq3 141 1e-28 >seq3 Length=3549891 Score = 141 bits (156), Expect = 1e-28 Identities = 346/516 (67%), Gaps = 15/516 (3%) Strand=Plus/Minus Query 159273 TGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTA 159332 ||| ||||| || | ||| ||| | | || || ||| | || | |||||||||| Sbjct 1484591 TGAGATCACTGGTATGGATGCTACCACTCTTCAGCCCAACTCTGGTGCTCAGGGTGAGTT 1484532 Query 159333 TGCAGGACTGTTAGCA--ATCCAAGCATACCATCAAGGATCAGGA-GATGATAAAAGAAA 159389 ||| || || | || ||| | || ||||| | ||| || || | || || |||| Sbjct 1484531 TGCTGGTCT--TCGCTGTATCAAGGCCTACCA-CGAGGCTCGTGATGGAGACAAGCGAAA 1484475 Query 159390 TGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGG 159449 || ||| | || || | || || || || || || ||||| || || | ||||| || Sbjct 1484474 GGTCTGTCTTATCCCTGTTTCTGCTCACGGTACCAACCCTGCTTCTGCTGCCATGGCTGG 1484415 Query 159450 GATGAAAGTTGTAGGTGTCAAGTGTGATG--ATGA-TGGCAACATAGACATCAAAGATCT 159506 ||||| ||||| |||||||||||| | | || ||| ||| | || ||| ||||||| Sbjct 1484414 TATGAAGGTTGTTACTGTCAAGTGTGACGGCAAGACTGGTAACCTGGATATCGAAGATCT 1484355 Query 159507 AGAG---AAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATATCC 159563 || ||| || || | | | ||| || | ||| ||| |||| ||||| Sbjct 1484354 CAAGGCCAAGTGTGC---CAAGCACGCTGATGAGCTTGCTGCTATCATGGTTACTTATCC 1484298 Query 159564 ATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGAA 159623 ||||| ||||| || || | | || | || | ||| | |||| || ||| | Sbjct 1484297 CTCTACTTTCGGTGTCTTCGAGCCTGAGATTAAGCAAGTCTGTGATCTTGTCCACGAGCA 1484238 Query 159624 TGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACC 159683 ||| |||| || || | || ||||| || | || || ||| | ||||| | || Sbjct 1484237 TGGCGGTCTTGTCTACATGGACGGTGCCAACATGAACGCTCAGATTGGTCTCTGCAGCCC 1484178 Query 159684 ATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACA 159743 ||||| |||||| ||||| |||||||| ||| | || ||||| ||||||||||| || Sbjct 1484177 CGGTGACATTGGTGCTGATGTCTGTCATCTCAACCTCCACAAGACCTTCTGTATTCCCCA 1484118 Query 159744 TGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 || ||||| ||||| || || |||||||| | ||| Sbjct 1484117 CGGCGGTGGTGGTCCCGGTGTTGGTCCTATCGCTGT 1484082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588048193588240