Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 4e-13 >seq3 Length=3549891 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || || || || || || ||||| || || ||| ||||| | || || Sbjct 3007117 ACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGACCATCCTCA 3007058 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||||| || ||||| || |||||||||||||| | |||| ||||||||||| Sbjct 3007057 AGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCGGGAGGAATACCCTCCTTGTCTTGG 3006998 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | | | || || | ||| || |||| ||||| || ||| Sbjct 3006997 ATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCTTT 3006938 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | || || ||||| || ||||| Sbjct 3006937 CCAGTAAGGGTCTTGACAAAGATTTGCAT 3006909 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| || ||| ||| || ||||| ||||||||||| ||| | || |||| || | ||| Sbjct 3006602 ATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTG 3006543 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| ||||| || |||| || || || || | ||| | ||||||||||| |||||| Sbjct 3006542 CTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGAATCTT 3006483 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 || || | | || || || | ||| ||||| | || || || || || || Sbjct 3006482 GGACTTGACGTTGTCGATAGTGTCGGATGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 3006423 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || |||||||| Sbjct 3006422 CAGGGTCTTGACGAAGATCTGCAT 3006399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380935701145107