Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq15 354 2e-92 seq4 196 9e-45 >seq15 Length=1128247 Score = 354 bits (392), Expect = 2e-92 Identities = 1229/1887 (65%), Gaps = 98/1887 (5%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| |||||||||||| || || || ||||||||||||||||| Sbjct 833446 ACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTCTTG 833387 Query 212613 AGGCC---CTTGCCCCAGCCGTGCAT-GTGCATTGCTGTGAGTTTCTTCAGCTTAATATT 212668 ||||| ||| |||||| |||| |||||| |||| |||| | || | Sbjct 833386 AGGCCAAGCTT---CCAGCC-TGCAAAGTGCATACTCGTGA---TCTTGCCC---ATCGT 833337 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 |||| | | |||| | |||||| || || ||| || ||||| | | Sbjct 833336 GGGGTCCTTCATGTGG---------ATGTTCAGTGATTGGGACTGATCAATGAAGGCACC 833286 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | ||||| ||||| | | || | | ||| || | |||||| || ||||| | | Sbjct 833285 TCGATCAGCAGCCATCTGGACGACCTGGCGCTGAGAAATCTCCCAAACAGTCTTATATAG 833226 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAG 212848 | |||| || | |||| | ||| |||||||| | || || || |||| Sbjct 833225 GGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTGAATGGAACC-------ATTCTCAG 833173 Query 212849 C--TGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACC 212900 | || | ||| ||| | ||| ||| || ||| || | ||| ||||| | Sbjct 833172 CAATG-ATGCGGTTCTTCATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGC 833114 Query 212901 AGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAA 212960 || |||||||| | |||||| ||||| | ||| || | | |||||| | || || Sbjct 833113 AGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGGCGCTGGTAGATATTGGAG 833054 Query 212961 GTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATG 213020 ||||||||||||| || ||||||||| ||||||||||| | ||| ||||| || ||||| Sbjct 833053 GTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAAGTACTGGCAGTAGGCATA 832994 Query 213021 GGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGC---CGAAGC-TC 213076 ||||| | || |||||||| | | ||||| | | ||| | ||||| || Sbjct 832993 GGAGCAAGGAGCAGACTGTTACGGATACCGTGT--GTCT-TGACTTCCTCTCGAAGAGTC 832937 Query 213077 TGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAA 213136 | |||||||||| | |||| | ||| |||||||||||||||||||| | Sbjct 832936 T-CCCAGTCCCAGAGGTCAGAGGG---------CTTGACGTTCCACATGTCAAACTGGAG 832887 Query 213137 GATGCCTTTGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGG 213192 ||| || |||| |||| |||| | | | |||||||||||| | |||||| | Sbjct 832886 GATACC----CTCAGAGGCGGGAGAACCCTTGAAGGTGGAGTAGGGGCCCTCCTCCTTAG 832831 Query 213193 CCAGCTCGCA-GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251 |||||| ||| ||| || |||||||||| || ||||| ||||| |||| | ||||| Sbjct 832830 CCAGCT-GCACGGAGGCAGTGAGGGCAGCGTGATAAATGGTCTCAAAGATCTGCTTGTTG 832772 Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311 |||| ||||| || ||| ||||||||| || |||| |||| || || Sbjct 832771 AGCTCACGAGCCTCGGGTGACTCGAAGGGCATACGCAGAGCAAGGAAAGCATCGGCAAGG 832712 Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370 ||||| || || | || ||||||| ||| | || |||| ||| |||| ||||| | Sbjct 832711 CCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGC-CTCCTGGAC 832653 Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430 ||||| ||| |||||||||||||| |||||||| | | || | |||| | Sbjct 832652 AGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTT 832593 Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCT-GCACAAACTCAGGCAGGGC-G 213488 | || | || |||| |||||| | || | | | | | | ||||| | Sbjct 832592 GTGCAACTTCT------TGAAGTCGTAGCAAGCCTCATCGTAGTTGATGAAGGAGGGCAG 832539 Query 213489 ATGCTG----GCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTC 213544 | | | || |||||||| || || ||||| | | | | |||||| || || || Sbjct 832538 AGACAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCGGGGGCACAGTACTCGATAATTTC 832479 Query 213545 GGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGC 213604 ||||| |||||| | |||||||| || ||||||| ||||| ||| |||| Sbjct 832478 AGTGCAAAGGTTGGAACTACGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCA 832419 Query 213605 AGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT 213664 || |||||||||||||||| | ||| |||||||| ||||| | | || || | Sbjct 832418 AGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTA 832359 Query 213665 CCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTC 213724 |||||| | | ||||| | | | ||| | | | | |||||||| ||| Sbjct 832358 CCAGAGCTTCTGAGCCTTAATGGTCTTGC-GACCCTTGCCCTCCTT--CTCGTACTTTTC 832302 Query 213725 GTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACA 213784 ||| || | | ||| || | || || | | || || || || ||| || Sbjct 832301 GTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATTGGGGCA 832242 Query 213785 CATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAG 213844 ||| || ||||||| |||| | | || | || |||||| || || |||| ||| || Sbjct 832241 CATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAG 832182 Query 213845 CGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAG 213904 || ||| ||||| | || | ||| ||| || ||| || || ||||| || Sbjct 832181 GGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAG 832122 Query 213905 AAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCT 213961 || || |||| || | |||||| ||||| | |||||||||||| || || | || | Sbjct 832121 GAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTT 832062 Query 213962 CTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAG 214021 |||||||||||||| || || || ||||||||| || || | || || | Sbjct 832061 GTTGCCGCCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAC 832002 Query 214022 CCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGTTGCT 214078 || || || ||| |||||||| || || || || ||||| | || | | | ||| Sbjct 832001 ACCATTCGA-TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCA 831943 Query 214079 CATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTC 214138 ||| ||| || || ||||| || ||||||||||||||| ||| | | | ||| || Sbjct 831942 CATTCAGA--CCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC 831885 Query 214139 CATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGG 214198 ||| || | || |||||||| | | | | ||||||||| || | ||||| Sbjct 831884 GTAGATTCCCTCAATACTGTCATCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGG 831825 Query 214199 CCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAG 214258 | | | ||| | ||||| ||||||||| ||||| | | |||||| |||| | Sbjct 831824 CTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACAT 831765 Query 214259 GAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAG-CGCACC 214317 || |||| ||||||| |||| ||| || | ||| | || | || | Sbjct 831764 CAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGACACA-C 831706 Query 214318 TCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGC--CCTTGAGCAGGTAGGA 214375 ||| | ||||||||| || | ||| | ||| | | |||||| ||||| || Sbjct 831705 GCATGATCATGTGCTGAGGGCGCTCGA--CAATCTTACCGTCAATCTTGAGGAGGTATGA 831648 Query 214376 GCGCTCCAGAGTCTTGAACCCAAAGTA 214402 ||||||| ||||||||| |||||||| Sbjct 831647 TCGCTCCAAAGTCTTGAAGCCAAAGTA 831621 >seq4 Length=3324183 Score = 196 bits (216), Expect = 9e-45 Identities = 491/738 (67%), Gaps = 21/738 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| | || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 1757895 CTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 1757954 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCA-GCA 47957 ||||||| ||||||||||| | || || ||| | || ||| | || | | Sbjct 1757955 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCT-TCTCGTTGCCAAGAGCGACAAGGA 1758013 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | |||| |||||| |||| ||||| | ||||||| ||||||||| | ||||| Sbjct 1758014 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGG 1758073 Query 48018 ACACGGGCAA-AGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| || || ||||| ||||| ||||||| ||| || ||||| || | || Sbjct 1758074 -CACAGGGAAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTAATGATA 1758132 Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGC-TTG------GCATAGAGCAT 48129 | || || |||| ||| || ||| | | ||| | | ||| | Sbjct 1758133 TCCTGAATCA-----TCTGC----TTGCTG-GCACGACCCTTGAGGTGAGAGTGGAGGAG 1758182 Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 |||||||||||| |||| | || ||||| || ||||||| |||||||||| || Sbjct 1758183 GCAGGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAG 1758242 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 ||| ||||||| || | || ||||||||||| || | ||||| | ||| |||||| Sbjct 1758243 ACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAA 1758302 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 ||| ||||| || || ||||| || ||| | || | || || | || ||| || Sbjct 1758303 GATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTG 1758362 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCG 48369 |||||| | |||||||| |||||||| |||||| || || || || ||||| Sbjct 1758363 GATCCATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATAGTGTCAATGGCGTT 1758422 Query 48370 GAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACAT 48429 |||||| | | | || | | ||| | ||||| || || | ||| | Sbjct 1758423 GAAGAGGTAGGTTCGCTGGGCGGGCTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGT 1758482 Query 48430 CTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC 48489 ||| ||||| | ||||| || ||||||||| ||||||||| | ||||| | Sbjct 1758483 CTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGGAT 1758542 Query 48490 CTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGC 48549 ||| || || ||| | ||| | || ||||| ||||| || |||||||| ||||| Sbjct 1758543 CTGGACCTCGCCACTGAAACGCTCGACGAGGTTCTCGTTGACAATGCCATCTGAGGCAGC 1758602 Query 48550 AAAGAAGGCAAGGACATG 48567 ||||| ||||||| ||| Sbjct 1758603 GAAGAAAGCAAGGATATG 1758620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931528037538560