Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq15 248 2e-60 seq4 167 4e-36 >seq15 Length=1128247 Score = 248 bits (274), Expect = 2e-60 Identities = 814/1235 (66%), Gaps = 69/1235 (6%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 || ||||||||||| || ||||||||||||||| ||||||||| ||| | |||||||| Sbjct 832813 GTGAGGGCAGCGTGATAAATGGTCTCAAAGATCTGCTTGTTGAG-CTCACGAGCCTCGGG 832755 Query 221476 AGAAGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533 || ||||||||||||||| | | ||||| | ||||| || ||||| || || | | Sbjct 832754 TGACTCGAAGGGCATACGCAG-AGCAAGGAAAG-CATCGGCAAGGCCCTGAACACCAAGA 832697 Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591 || ||||| | ||| | | |||| | ||| | || |||| || || || ||| | Sbjct 832696 CCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGC-CTCCTGG-ACAGGGTAGTGGTTCA 832639 Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651 | ||||| | ||||| ||||| || | | || | | |||| | || ||||| | Sbjct 832638 CATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTTGTGCAACTTCTTGA 832579 Query 221652 GATTGAACACCAACTCGCCGC--CGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAAC 221709 | | | ||| ||| | ||| || || | || | | || | | Sbjct 832578 AGTCGTAG--CAA---GCCTCATCGTAGTTGATG---------AAGGAGGGCAGAGACAG 832533 Query 221710 GCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTA---TACTGTATGATCTCTGT 221766 ||| ||||| || || || |||||||| | || | |||| || || || || Sbjct 832532 AGAGGCAAGGTTGCAGACAGCGACCTCGTC---GGGGGCACAGTACTCGATAATTTCAGT 832476 Query 221767 ACAGAGGTTGCTGCACTT--GATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCA 221824 || |||||| | ||| |||||| || |||| || || || |||||| ||| | Sbjct 832475 GCAAAGGTTG--GAACTACGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAA 832418 Query 221825 GCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCC 221884 || |||||||||||||| || || || ||||| ||| ||| | ||||| || | Sbjct 832417 GCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTAC 832358 Query 221885 CAGAGTTCTCTG-GCGCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATA 221937 ||||| | |||| || | | ||| | |||| | | |||| |||||| || Sbjct 832357 CAGAGCT-TCTGAGCCTTAATGGTCTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTA 832299 Query 221938 CCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGC 221997 | ||||| | | |||| || ||||| ||| | ||||| || ||| Sbjct 832298 C-------AGAGCCT--CGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATT 832248 Query 221998 GGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGAT 222057 ||| |||||||| |||||| ||| | || || | || |||||| || || ||||| Sbjct 832247 GGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGAT 832188 Query 222058 CCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAG 222117 ||| || || | || || || | || || ||||||| |||| ||| || | || Sbjct 832187 CCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAG 832128 Query 222118 ATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGG 222177 ||| | ||||| || | |||| |||||| ||||| || |||| ||| | ||| ||||| Sbjct 832127 ATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGG 832068 Query 222178 TCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCG 222236 |||||||||||| ||||| || | ||| | ||| | |||||||| ||||| | | Sbjct 832067 TCGCTTGTTGCCGCCCTGGTCGA-CATACCGAGCAGTGTTGTTGAAGACACGAAGCATAG 832009 Query 222237 GTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT 222296 | || | || || ||| ||||||||| || ||||| | || || | || Sbjct 832008 GAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCAC---GGA 831952 Query 222297 TACTG-GCAGA--CATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGA 222353 ||| | ||| | || || |||||||| || || ||||||||||| ||| |||||| Sbjct 831951 TACGGTGCACATTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGA 831892 Query 222354 GAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACA 222413 |||| || ||| ||||| ||| ||| ||||| | | | || || ||||| |||| Sbjct 831891 GAGTATCGTAGATTCCCTCAATACTGTCATCCTTCATATCAACCAAGAAGCAAGATGACA 831832 Query 222414 TCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCC 222473 || | | | || | ||| || || |||||||| || || || ||| | | Sbjct 831831 ATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGC 831772 Query 222474 TAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGA-ATCTGCAT 222531 |||||||||||| ||| ||||| | ||||| |||| | || ||| || | | || Sbjct 831771 TAGACATCAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACA- 831713 Query 222532 GGCGCATCTCATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGC 222589 | | || | |||| ||||| ||| || | ||| ||| || | | || ||| Sbjct 831712 GACACA-CGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCT--TGAGG 831656 Query 222590 AGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTA 222624 ||||| ||| |||| ||||||||| |||||||| Sbjct 831655 AGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTA 831621 Score = 87.8 bits (96), Expect = 3e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | ||| || | | |||||| | || || ||| | || Sbjct 833105 GTTGACAACCTGGAACTCACCAGCGAGAACACGGCGCTGGTAGATATTGGAGGTGTAGGG 833046 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || ||||||||||||||| ||||| | || ||||| || ||||| || || | Sbjct 833045 CTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAAGTACTGGCAGTAGGCATAGGAGCAAG 832986 Query 221236 CAGCAGACTGTTGCGCAGTCCGAATCTATTGATGGACTTTCTCAGCGTGTTCCAGTCACA 221295 ||||||||||| || | ||| | | |||| || || || || | |||||| || Sbjct 832985 GAGCAGACTGTTACGGATACCGTGTGTCTTGACTTCCTCTCGAAGAGTCTCCCAGTCCCA 832926 Query 221296 G 221296 | Sbjct 832925 G 832925 >seq4 Length=3324183 Score = 167 bits (184), Expect = 4e-36 Identities = 388/575 (67%), Gaps = 19/575 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | ||||||||||||||| | || |||||| || || ||||||||||| Sbjct 1758740 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTC 1758681 Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTT--TCTC 25590 ||||||| | ||| |||| || || || | ||||||||| || |||| Sbjct 1758680 TCCAAGGATCTCCACGACTGGAACAACCGC-CTGACTGCTGACGAGCAGTTCTTCGTCTC 1758622 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 || | | || ||||| || ||||| ||||| || || |||||||| || |||| Sbjct 1758621 TCATA--TCCTTGCTTTCTTCGCTGCCTCAGATGGCATTGTCAACGAGAACCTCGTCGAG 1758564 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | |||| | || || ||| | ||||| || |||||||| |||||||| Sbjct 1758563 CGTTTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGCTTCTACGGCTTCCAGATCATG 1758504 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGAC 25767 || || || | ||||| ||| || || || || || || ||||| | || Sbjct 1758503 ATGGAGAACATTCACTCCGAGACCTACTCC---CTCCTCATCGACACCTACATCAAGGAG 1758447 Query 25768 GTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCAC-ATACCCAGCATCAAGAGGAA 25826 |||| || || || || ||||| || ||| || ||| ||||| | ||| Sbjct 1758446 CCCGCCCAGCGAACCTACCTCTTCAACGCCATTGA-CACTATTCCCTGCATCCGAAAGAA 1758388 Query 25827 GGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGT 25886 ||| |||||||| |||||| | || | | | |||| | |||| || || Sbjct 1758387 GGCTGACTGGGCCATCCGATGGATCCAGGATAAGGACTCCTCCTTTGCCCAGCGTCTCGT 1758328 Query 25887 AGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT 25946 ||||| ||||| || ||||| ||||| ||||| ||| | || || | ||||||||||| Sbjct 1758327 TGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTGGCT 1758268 Query 25947 CAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACG 26005 |||| || || ||||||||| ||| ||||| ||||||||||||||| | |||| Sbjct 1758267 CAAGAAGCGTGGTCTCATGCCCGGTCTG-ACTTTCTCCAACGAGCTCATCTCTCGTGACG 1758209 Query 26006 AGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 ||||||| |||| || ||||||||||| ||| || Sbjct 1758208 AGGGTCTTCACACTGACTTTGCCTGCCTCCTCCAC 1758174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928840051280960