Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 2e-11 >seq3 Length=3549891 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || | || || || |||||||| ||| || | || Sbjct 3006909 ATGCAAATCTTTGTCAAGACCCTTACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 3006968 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || ||| ||||| ||||| | || |||||| Sbjct 3006969 GATACCATTGATAATGTGAAGAGCAAGATCCAAGACAAGGAGGGTATTCCTCCCGATCAA 3007028 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| |||| |||||||| ||||| ||| | || ||| | |||| | |||| || ||| Sbjct 3007029 CAGCGACTCATCTTTGCTGGCAAGCAACTTGAGGATGGTCGAACTCTTTCCGACTACAAC 3007088 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 || || || ||||||||||| ||| |||| Sbjct 3007089 ATCCAGAAGGAATCTACTCTCCACTTGGT 3007117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425402679490011