Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq3 138 1e-27 >seq3 Length=3549891 Score = 138 bits (152), Expect = 1e-27 Identities = 345/516 (67%), Gaps = 15/516 (3%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||| | |||||||| || || ||||| ||||| || || ||||||||||| ||||| || Sbjct 1484082 ACAGCGATAGGACCAACACCGGGACCACCACCGCCGTGGGGAATACAGAAGGTCTTGTGG 1484141 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || |||||||| ||||| |||||| ||||| || | ||||| | ||| || Sbjct 1484142 AGGTTGAGATGACAGACATCAGCACCAATGTCACCGGGGCTGCAGAGACCAATCTGAGCG 1484201 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || ||||| || | || || |||| |||| || || || | | ||| | Sbjct 1484202 TTCATGTTGGCACCGTCCATGTAGACAAGACCGCCATGCTCGTGGACAAGATCACAGACT 1484261 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 || | || | | || || ||||| ||| || ||||| |||| ||| ||| | Sbjct 1484262 TGCTTAATCTCAGGCTCGAAGACACCGAAAGTAGAGGGATAAGTAACCATGATAGCAGCA 1484321 Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTT---CTCTAGATCTTTGATGTCTATGTTGCCA 138479 || ||| | | | || || ||| || ||||||| ||| || | ||| ||| Sbjct 1484322 AGCTCATCAGCGTGCTTG---GCACACTTGGCCTTGAGATCTTCGATATCCAGGTTACCA 1484378 Query 138480 -TCAT--CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGA 138536 || | | |||||||||||| ||||| ||||| || |||||| | ||| |||||| Sbjct 1484379 GTCTTGCCGTCACACTTGACAGTAACAACCTTCATACCAGCCATGGCAGCAGAAGCAGGG 1484438 Query 138537 TTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATC-TCCTGATCC 138595 || || || || || || | || || ||||| || |||| || || | || || || Sbjct 1484439 TTGGTACCGTGAGCAGAAACAGGGATAAGACAGACCTTTCGCTTGTCTCCATCACGAGCC 1484498 Query 138596 TTGATGATATGCTTGGAT--TGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTA 138653 | | || || || | ||| || | || || ||| |||||||||| | || | ||| Sbjct 1484499 TCG-TGGTAGGCCTTGATACAGCGA--AGACCAGCAAACTCACCCTGAGCACCAGAGTTG 1484555 Query 138654 GGTTGTAATGATATAGAATCAAAACCTGTGATATCA 138689 || || | | ||| ||| | ||| ||||| ||| Sbjct 1484556 GGCTGAAGAGTGGTAGCATCCATACCAGTGATCTCA 1484591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578995439870680