Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq15 199 5e-46 seq4 107 2e-18 seq1 87.8 2e-12 >seq15 Length=1128247 Score = 199 bits (220), Expect = 5e-46 Identities = 1133/1783 (64%), Gaps = 55/1783 (3%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| ||| ||||| ||||||| || | | || ||| || || || || || || Sbjct 831686 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 831745 Query 75271 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 75328 ||||||||||||| | |||||| |||| | | ||| || || | || || ||| Sbjct 831746 CTTGGAGACATACAATCTGATGTCTAGCAAGTTCT--TCACGCATGCTTCCCCCACGCTC 831803 Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 |||||||| || || || || || |||| ||||||| | | | | ||||| Sbjct 831804 TTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGAT 831863 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 ||| || | || ||||| | ||||| | | ||||| ||||| ||| |||| Sbjct 831864 GACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCT 831923 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-A 75506 || |||||||| || | | || | | | || | | ||| || ||| || | Sbjct 831924 GGTGGTATTGGTCTGAATGTGCACCGTATCCGTGCTACTGG--CTCATACATCGCCGGTA 831981 Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566 | || ||| ||| ||||| || |||| |||||||| || || ||| ||| || || | Sbjct 831982 CCAACGGTACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGGT 832041 Query 75567 ATGTAAATCAAGCGGGGCGTCG-CAAGGGGTCCA------TCGCGGTCTACTTGGAACCA 75619 |||| | || ||||| | |||| | || | || ||||| | || || Sbjct 832042 ATGTCGACCA----GGGCGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCT 832097 Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679 ||||| | ||| || | ||||||||||| | || ||||| ||| | || |||| | Sbjct 832098 TGGCACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGG-T 832156 Query 75680 CGGTGTA-GAGATCTCTTTTCAT-CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTG 75737 | ||| | || || ||| | | |||| ||||| || || |||||||||||||| |||| Sbjct 832157 CCGTGCCCGTGACCT-TTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTG 832215 Query 75738 AGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGG 75797 | || ||| | ||| | || | || || | || || || ||| ||||| Sbjct 832216 AAAAGAACGGTGACTGGACACTGATGTGCCCCAATGAGTGCCCTGGCCTCGCCGACTGCT 832275 Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATG 75854 || |||||||| || || || ||| |||||| || ||||||| | | ||| Sbjct 832276 ACGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAAGA 832335 Query 75855 CGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913 | | | || | | || | | ||| | || ||||| | | ||||| ||||| ||| Sbjct 832336 CCATTA----AGGCTCAGAAGCTCTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGA 832391 Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973 | |||| ||||| |||||||||||||| ||| ||||| ||||||||||| | || Sbjct 832392 AACCCATTCATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAAAAGAACCTCGGT 832451 Query 75974 ACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG 76033 || ||| || || || |||||||| |||||| | |||||| | || ||| Sbjct 832452 ACCATCCGTAGTTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCCCCCGACGAGGTC 832511 Query 76034 GCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGC 76090 ||||| ||||| | || || | | || || | ||| | || ||| || || Sbjct 832512 GCTGTCTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCATCAACTACGATGAGGCTTGC 832571 Query 76091 ACTTTTGATTATGAAAAACTT-CATGAAATCACAAAGATTGTTACCAAAAATCTAAACCG 76149 | || | | || || || || | ||| || |||||| || || ||| Sbjct 832572 ---TACGACT-TCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAA 832627 Query 76150 AGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAG 76209 |||| || || || || || || || || || ||| ||||| ||| | Sbjct 832628 GATCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCG 832687 Query 76210 ACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCAT 76268 ||| |||||| | |||||||| || || || |||| || || | ||| | | | | Sbjct 832688 ACCCATTGGTCTTGGTGTTCAGGGCCTTGCCGATGCTTTCCTTGCTCTGCGTATGC-CCT 832746 Query 76269 TTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 | || ||| || || ||| | || | |||||||| ||||| |||||||| Sbjct 832747 TCGAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTTGAGACCATTTATCACGCTG 832806 Query 76329 CCCTGGAGGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGT 76387 |||| || ||| | ||||| | | | || |||| || || ||||| Sbjct 832807 CCCTCACTGC-CTCCGTGCAGCTGGCTAAGGAGGAGGGCCCCTACTCCACCTTCAAGGGT 832865 Query 76388 TCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT--CA 76445 |||||||| || | || | || |||||||| |||| |||| || || || || | Sbjct 832866 TCTCCCGCCTCTGAGGGTATCCTCCAGTTTGACATGT-GGAACGTCAAGCC-CTCTGACC 832923 Query 76446 ACTACGACTGGGA---TGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 76502 || |||||||| | ||| ||||| ||||| | ||| | |||||||||| Sbjct 832924 TCTGGGACTGGGAGACTCTTCGAGAGGAA---GTCAAGACACACGGTATCCGTAACAGTC 832980 Query 76503 TTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 76562 | | | || || ||||| || ||| || | || || |||| || || || |||| Sbjct 832981 TGCTCCTTGCTCCTATGCCTACTGCCAGTACTTCCCAGATTCTGGGCAACAACGAGTGCT 833040 Query 76563 TTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTG 76622 | || || ||||| | || ||||||| | | | ||||| |||||||| ||| Sbjct 833041 TCGAGCCCTACACCTCCAATATCTACCAGCGCCGTGTTCTCGCTGGTGAGTTCCAGGTTG 833100 Query 76623 TCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGG 76682 ||||| || |||| ||||| | || ||||| |||||| | | ||||||| Sbjct 833101 TCAACCCCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGA 833160 Query 76683 ATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCA 76742 | | ||| | | | |||||||||||| || || | | ||||| | ||| ||| Sbjct 833161 ACCGCATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCA 833220 Query 76743 AGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAG 76802 || || || || || ||||| || | | ||| | | ||||| || | Sbjct 833221 AGGCCCTATATAAGACTGTTTGGGAGATTTCTCAGCGCCAGGTCGTCCAGATGGCTGCTG 833280 Query 76803 ATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGA 76862 |||| ||| |||||||||||| ||| |||| | |||| | || |||| Sbjct 833281 ATCGAGGTGCCTTCATTGATCAGTCCCAATCACTGAACATCCACATGAAGGACCCCACGA 833340 Query 76863 TGTCCAAGCTCTCTTCTATGCA-TATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATG 76921 || |||| || | |||||| | || | || ||||| | || ||||| ||||| ||| Sbjct 833341 TGGGCAAGATCACGAGTATGCACTTTGCAGGC-TGGAAGCTTGGCCTCAAGACCGGCATG 833399 Query 76922 TACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 ||||| || || || |||| || || |||||||||| Sbjct 833400 TACTACCTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCA 833442 >seq4 Length=3324183 Score = 107 bits (118), Expect = 2e-18 Identities = 329/503 (65%), Gaps = 18/503 (4%) Strand=Plus/Minus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||||| | ||||| || |||| | | | || | ||| |||||| ||| |||| Sbjct 1758392 AAGAAGGCTGACTGGGCCATCCGATGGATCCAGGATAAGGACTC-CTCCTTTGCCCAGCG 1758334 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 || |||| || || || ||||||||||||||| || | ||| | |||| | Sbjct 1758333 TCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTT 1758274 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| | |||||||| ||||||||||| || || ||||| || || || || || || Sbjct 1758273 CTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACTTTCTCCAACGAGCTCATCTCTCG 1758214 Query 65202 AGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAA---TAG 65258 || |||||||| ||| || |||||| || ||| || | || | || | | Sbjct 1758213 TGACGAGGGTCTTCACACTGACTTTGCC-TG--CCTCCTCCACTCTCACCTCAAGGGTCG 1758157 Query 65259 ACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTT 65318 ||| | | | || || | ||| | | || || || |||||| | | ||| Sbjct 1758156 TGCCAGCAAGCAGATGATTCAGGATATCATTACTGATGCCGTCACCATTGAGCAGGAGTT 1758097 Query 65319 CATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTA 65378 | || || || || || ||| ||| |||| ||||||||||| ||| |||| Sbjct 1758096 CCTCACTGAGGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAGTA 1758037 Query 65379 CATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCCA-----TTTGG 65433 |||||||| || | ||||||||||| |||| || | | | | Sbjct 1758036 CATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGG-----CAACGAGAAGGTCTAC 1757982 Query 65434 AACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTC 65493 || || | || || || ||||| ||||| ||||| ||||| || |||||||||||| Sbjct 1757981 AAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTC 1757922 Query 65494 TTTGAGAAGCGAGTTGGGGACTA 65516 || |||||||| |||| ||||| Sbjct 1757921 TTCGAGAAGCGTGTTGCCGACTA 1757899 >seq1 Length=5319023 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 27858 GCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCC 27917 |||||| || |||||||| || ||||| || || | ||| ||||||||||| || Sbjct 2430067 GCGCTCCAGAACAAGTTGAGCAATGCGGTCGCCCTCCTTCACCTCAAAGTCGGATTCATT 2430126 Query 27918 GTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACC 27977 || ||||| || | ||| ||||| | ||| ||| |||| ||| || ||||| || || Sbjct 2430127 ATGGTTGAAAAGCAGGACCTTGACCTGACCGCGATAATCGGCATCGATGACACCAGCGCC 2430186 Query 27978 AACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCAT 28030 | ||| |||||| ||||||||| ||||| || |||| || |||| Sbjct 2430187 TGTGTCAATGAAATGCTTGGAAGCGAGACCCGATCGAGGGGCAATGCGTCCAT 2430239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566550037920