Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1 300 2e-76 seq3 199 5e-46 seq5 168 9e-37 seq7 141 1e-28 >seq1 Length=5319023 Score = 300 bits (332), Expect = 2e-76 Identities = 560/820 (68%), Gaps = 3/820 (0%) Strand=Plus/Plus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 ||||| || || || | ||||| || || |||||||| ||||| || |||||| | ||| Sbjct 986340 GCTCTGCGACGTCTCCGAACTGCTTGCGAGCGTGCCAAGCGAACACTATCTTCTTCTGCT 986399 Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180 || || ||||||| || || | || || || ||||||||||| || |||| ||| Sbjct 986400 CAGACCTCCATTGAGATCGACTCTCTCTTCGAGGGTATTGACTTCTACACCTCTATCACC 986459 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 ||||| ||||| || ||| | | ||| | || | || | || || || Sbjct 986460 CGTGCTCGTTTCGAGGAGCTCTGCCAGGATCTCTTCCGATCCACCATCCAGCCCGTCGAC 986519 Query 196241 CAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300 | || ||| ||||| ||||| || ||||| || | || |||||||| || || Sbjct 986520 CGTGTCCTTACCGACGCCAAGATCGACAAGTCCCTTGTCCACGAGATTGTCCTCGTCGGT 986579 Query 196301 GGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGAT 196360 || || ||||||||||| | || || | | | || |||||| || || Sbjct 986580 GGCTCTACCCGTATTCCCCGTGTCCAGAAGCTCATCACCGACTACTTCAACGGAAAGGAG 986639 Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420 ||||| | |||||||| ||||| || ||||| || ||||| ||||| ||||| || Sbjct 986640 CCCAACAAGTCCATCAACCCCGATGAGGCTGTTGCCTACGGTGCCGCCGTCCAGGCCGCG 986699 Query 196421 ATTCTCTCAGGTGTTGACAATAATAACGTC--CAA-GATCTTCTGCTACTTGATGTTGCA 196477 |||||||| |||| | | || | | ||| || | ||||| || ||||| || Sbjct 986700 ATTCTCTCCGGTGACACCTCCAGCAAGGCCACCAACGAGATCCTGCTTCTCGATGTCGCT 986759 Query 196478 CCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAAC 196537 ||| | || || ||| | || || || |||||| | ||||| || |||| | ||| Sbjct 986760 CCCCTCTCTCTCGGTATCGAGACCGCTGGTGGTATGATGACCAAGCTTATCCCCCGCAAC 986819 Query 196538 ACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGT 196597 || || || || || |||||| | ||||| || || | ||||| || ||||| ||| Sbjct 986820 ACCACCATCCCCACCAAGAAGTCCGAGGTCTTCTCCACCTTCTCCGACAACCAACCTGGT 986879 Query 196598 GTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGA 196657 |||| ||| || || || || || || || || | ||||| ||| | || | || Sbjct 986880 GTTCTTATCCAGGTCTACGAGGGTGAGCGTCAACGCACCAAGGACAACAACCTGATGGGC 986939 Query 196658 ACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGC 196717 | ||||| | || || || || |||| ||| | |||||||| |||||| | || | Sbjct 986940 AAGTTCGAGCTCACTGGTATCCCCCCTGCCCCCCGTGGTGTTCCCCAGATTGAGGTCACC 986999 Query 196718 TTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAA 196777 |||||| | || || || || || | |||||| | |||| || |||| ||||||| Sbjct 987000 TTCGATCTTGATGCCAACGGTATCATGAACGTCTCCGCTGTCGAGAAGGGCACTGGCAAG 987059 Query 196778 TCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGT 196837 || | |||||||| ||||||||||||||||| || || || |||||||| || || || Sbjct 987060 TCCAACAAGATTGTCATTACCAATGACAAGGGCCGCCTGTCCAAGGAGGAGATCGAGCGC 987119 Query 196838 ATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 ||| || | || || || ||||||| ||| || || |||| Sbjct 987120 ATGCTTAACGACGCTGAGAAGTACAAGGAGGAGGATGAGG 987159 Score = 242 bits (268), Expect = 5e-59 Identities = 433/628 (69%), Gaps = 7/628 (1%) Strand=Plus/Plus Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGAT 195421 || || ||| | || ||||| || ||||| || || || || | ||| | || || || Sbjct 983925 GATATCATCGCCAACGACCAGGGTAACCGAACTACCCCCTCATTCGTCGGTTTCACCGAC 983984 Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481 | || ||||| |||| |||||||| || || ||| |||||||||||| || ||| Sbjct 983985 ACCGAGCGTCTGATTGGTGATGCCGCCAAGAACCAGGTCGCTATGAACCCTCAGAACACT 984044 Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGAT 195541 ||||| ||||| ||||| | || ||||||||||| | || | || || | |||| Sbjct 984045 GTCTTCGACGCCAAGCGATTGATCGGTCGCAAGTTCGCCGACCCTGAGGTTCAGGCCGAT 984104 Query 195542 ATAAAGGACTGGTCTTATGAAG-TTGTT-CCCGGTGTGGCTGATAAGCCTATGATTAATG 195599 || ||| ||| | | | ||| | ||| | | ||||| ||||| | || | | Sbjct 984105 ATGAAGCACTTCCCCT-TCAAGATCGTTGACAAGGGTGGC----AAGCCCAACATCGAGG 984159 Query 195600 TTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGA 195659 | || || | || |||| || || | || || || || || ||||| | | | Sbjct 984160 TCGAGTTCAAGGGCGAGACCAAGACCTTCACCCCTGAGGAGATCTCTGCTATGATCCTAA 984219 Query 195660 TTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGA 195719 |||||| ||||| || || |||| | | || | ||||| || | || ||| | | Sbjct 984220 CCAAGATGCGTGAGACCGCTGAGTCTTACCTCGGCGAGACTGTCAACAACGCCGTTATTA 984279 Query 195720 CTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTG 195779 |||| ||||| ||||||| ||||| || || || || || ||||| || | | || | Sbjct 984280 CTGTCCCTGCCTACTTCAACGATTCTCAGCGTCAAGCCACCAAGGATGCCGGTCTCATCG 984339 Query 195780 CGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTC 195839 | ||||| ||| ||| |||| ||||| || || || || || || ||||| || |||| Sbjct 984340 CCGGTCTCAACGTTCTCCGAATCATCAACGAGCCTACTGCTGCCGCCATTGCCTACGGTC 984399 Query 195840 TGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899 | |||||||| || | || || || ||||||| ||||| ||||| ||||| | Sbjct 984400 TTGACAAGAAGGTTGAGGGCGAGCGCAACGTCCTGATCTTCGATCTTGGTGGCGGTACTT 984459 Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959 | ||||| || || || | |||||| | ||||| ||||| || ||| ||||||| |||| Sbjct 984460 TCGATGTGTCTCTCCTTACTATTGAGGAGGGTATCTTCGAGGTCAAGTCTACTGCCGGTG 984519 Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGA 195987 | ||||| || |||||||| || ||||| Sbjct 984520 ACACTCACCTGGGTGGTGAGGACTTCGA 984547 Score = 132 bits (146), Expect = 6e-26 Identities = 195/270 (72%), Gaps = 6/270 (2%) Strand=Plus/Plus Query 198443 TACGCGATTCAAGGATGTTGAGGGTATCGACTCAGCTAAGGATGAGCTCGAGGAGATTGT 198502 ||| || ||||| |||||| | ||| |||| ||| || || || || | || |||| Sbjct 3890635 TACTCGGTTCAACGATGTTCATGGTTGCGACGAAGCCAAAGAGGAACTGCAAGAAGTTGT 3890694 Query 198503 TGATTTTCTTAAAAACCCCGAAAAGTACTATGGAAGTGGTGCCCGAAT-CCCACGTGGTG 198561 ||| ||||| || || |||||||||| | || |||||| | | |||| | |||| Sbjct 3890695 TGAGTTTCTGAAGAATCCCGAAAAGTTCAGTGATCTTGGTGCTAAACTGCCCAAG-GGTG 3890753 Query 198562 CTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTG 198621 || || | ||| | || ||||||||||| || ||||| ||||| ||| | || || | Sbjct 3890754 TCCTCCTGGTTGGTCCTCCTGGTACTGGTAAGACGCTTCTTGCTCGAGCTGTTGCCGGCG 3890813 Query 198622 AATCGAGTGTCCCC--TTTCTTCAGTGCTCCGCGGCGAGTTTCATCGAGATGTTCGTTGG 198679 || | |||||||| ||||| || || | |||||||| | |||||| || ||||| Sbjct 3890814 AAGCCGGTGTCCCCTTTTTCTACA-TGTCTGGTAGCGAGTTTGA-CGAGATCTTTGTTGG 3890871 Query 198680 TGTTGGTGCTAAGCGCGTCCGGGAACTCTT 198709 |||||||| ||||| ||||| || ||||| Sbjct 3890872 CGTTGGTGCCAAGCGAGTCCGTGACCTCTT 3890901 >seq3 Length=3549891 Score = 199 bits (220), Expect = 5e-46 Identities = 185/234 (79%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || ||||| || || || || |||||||||||||| ||||| || Sbjct 3006399 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCATCC 3006458 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| |||||||||| || ||||| || || || ||||| ||| Sbjct 3006459 GACACTATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCCCCCGACCAG 3006518 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| | ||||| || || || |||||||| || || || || ||| ||||||||||| Sbjct 3006519 CAACGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAAC 3006578 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG--TGCAA 172093 |||| |||||||| ||||| || |||||||| | || || ||||| ||||| Sbjct 3006579 ATTCAGAAGGAGTCCACTCTTCATCTTGTTCTCCGCCTCCGTGGTGGCATGCAA 3006632 Score = 190 bits (210), Expect = 3e-43 Identities = 182/233 (78%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||||||||| || |||||||||||||| || || || || || || |||| Sbjct 3006904 GTGGTATGCAAATCTTTGTCAAGACCCTTACTGGAAAGACCATTACTCTGGAAGTCGAGT 3006963 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || || || || ||||| | || |||||| ||||| ||||| || ||||| |||| Sbjct 3006964 CATCCGATACCATTGATAATGTGAAGAGCAAGATCCAAGACAAGGAGGGTATTCCTCCCG 3007023 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| || ||||| || |||||||| || || ||||| ||||| || || || | || | Sbjct 3007024 ATCAACAGCGACTCATCTTTGCTGGCAAGCAACTTGAGGATGGTCGAACTCTTTCCGACT 3007083 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| | || ||||| |||||||| ||| | |||||| | ||||| |||||| Sbjct 3007084 ACAACATCCAGAAGGAATCTACTCTCCACTTGGTTCTACGTCTTCGTGGTGGT 3007136 >seq5 Length=3271200 Score = 168 bits (186), Expect = 9e-37 Identities = 730/1141 (64%), Gaps = 30/1141 (3%) Strand=Plus/Minus Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805 || |||||||| || ||||| || | | ||||| ||||| ||| ||| |||| || Sbjct 1513805 CAGCGACAGGCCACCAAGGATGCCGGTATCATTGCCGGTCTCAACGTTCTCCGAATCGTC 1513746 Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAA 195865 || || || || || || || || || || ||||| ||||||| | | | || | | | Sbjct 1513745 AACGAGCCCACCGCCGCCGCTATCGCCTACGGTCTTGACAAGACCGACGGTGA-GCGACA 1513687 Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925 || || | ||| |||||||||||||||||| || |||||||| || ||| ||||| Sbjct 1513686 GATC-ATCG-TCTATGATCTCGGTGGTGGTACCTTCGATGTCTCCCTCCTCTCCATTGAC 1513629 Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985 | ||||| ||||| || |||||| |||||||| || ||||| |||||||| |||||| Sbjct 1513628 GACGGTATCTTCGAGGTCCTGGCTACCGCTGGTGACACCCATCTCGGTGGTGAGGATTTC 1513569 Query 195986 GAT--GCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATA 196043 ||| || ||| || | | || | | ||| | | ||||| || || | Sbjct 1513568 GATCAGCGAGTCATCAAC--TACTTCGCCAAGCAGTACAACCAGAAGAACAACGTCGACA 1513511 Query 196044 TTTC--TGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACG 196101 || | ||| || | ||| | || ||| | | || || ||||| || Sbjct 1513510 TTACCAAGGACCTC--AAGGCCATGGGTAAGCTCAAGCGTGAGGCCGAGAAGGCCAAGCG 1513453 Query 196102 AACTCTCTCTTCT----ACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAA 196157 ||||| |||||| | || | || ||||||| || | || |||| | Sbjct 1513452 TACTCTGTCTTCTCAGAAGAGCACCCGCA----TTGAGATCGAGGCTTTCCACAACGGCA 1513397 Query 196158 TTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTA 196217 ||||||| || |||||| || || || ||| | ||| ||| | || | Sbjct 1513396 AGGACTTCTCCGAGACCCTTACCCAGGCCAAGTTCGAGGAGCTCAACATTGACCTCTTCA 1513337 Query 196218 GGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGG 196277 |||| ||| | |||||||| || || || ||||| ||| | | ||||| | | Sbjct 1513336 AGAAGACCATGAAGCCTGTTGAGCAGGTTCTCAAGGACGCCAAGCTCAAGAAGTCCGACG 1513277 Query 196278 TTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTT 196337 |||| || || || || || || || || |||||||| || ||| |||| ||| | || Sbjct 1513276 TTGACGACATCGTTCTCGTCGGTGGTTCTACCCGTATCCCCAAGGTTCAGCAGCTCATTG 1513217 Query 196338 CTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTT 196397 ||||||||| || || | || ||| |||||||| ||||| || ||||| | Sbjct 1513216 AGGACTTCTTCAACAAGAAGGCTT---CCAAGGGCATCAACCCCGATGAGGCTGTTGCAT 1513160 Query 196398 ATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAGATC 196457 ||||| || || ||||| | | || || |||| || | || || | | Sbjct 1513159 TCGGTGCCGCTGTCCAGGCCGGAGTCCTTTCCGGTGAGGAGGGT----ACTTC--TGGTG 1513106 Query 196458 TTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGA 196517 || | || | ||||| ||| | |||| ||| | || || | ||||| || |||| Sbjct 1513105 TTGTCCTCATGGATGTCAACCCCTTGACCCTTGGTATCGAGACCACCGGTGGAGTCATGA 1513046 Query 196518 CTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGT 196577 |||| | ||| | ||||| |||| || || ||| || |||| || || Sbjct 1513045 CTAAGCTGATTCCCCGCAACACCGCTATCCCTACCCGCAAGAGCCAGATCTTCTCTACCG 1512986 Query 196578 ATTCCGATAATCAACCAGGTGTTCAT-ATTCAAGTATATGAAGGAGAACGCTCCCGTGCA 196636 | | ||||| || || ||| || | || || || | ||| || || || || | | | Sbjct 1512985 CTGCTGATAACCAGCC-CGTGGTCTTGATCCAGGTCTTTGAGGGTGAGCGATCTCTTACC 1512927 Query 196637 AAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGT 196696 ||||||||| | | || || | ||||| | || || ||||| | || || | || Sbjct 1512926 AAGGATAACAACATCCTCGGCAAGTTCGAGCTTACCGGTATTCCTCCCGCTCCTCGCGGC 1512867 Query 196697 GTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCT 196756 || || ||||| | || | ||||| | ||||| || || || || || ||| | || Sbjct 1512866 GTGCCTCAGATCGAGGTCTCTTTCGAGCTCGACGCCAACGGTATCCTCAAGGTCTCTGCC 1512807 Query 196757 GAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTT 196816 | || |||| | ||||| || || || ||||| |||||||| || ||| Sbjct 1512806 CACGATAAGGGCACCGGCAAGCAGGAGTCCATCACCATCACCAACGACAAGGGCCGTCTT 1512747 Query 196817 TCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876 | ||||| || || || ||||| || || || |||||| || || ||| || Sbjct 1512746 ACCCCTGAGGAGATCGAGCGCATGGTCGCTGAGGCTGAGAAGTACGCCGAGGAGGACAAG 1512687 Query 196877 G 196877 | Sbjct 1512686 G 1512686 >seq7 Length=2761656 Score = 141 bits (156), Expect = 1e-28 Identities = 140/181 (77%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 171871 TTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATC 171930 || ||||| ||||| || || || || |||||||||||||| ||||| || ||||| ||| Sbjct 1020136 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 1020195 Query 171931 GATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTT 171990 || || |||| ||||||| || || ||||| ||||| || || || || || ||||| Sbjct 1020196 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAACAGCGACTG 1020255 Query 171991 ATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAG 172050 || || |||||||| ||||| || ||||| || || ||| | || |||||| | || ||| Sbjct 1020256 ATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGAACTCTCTCCGACTACAACATCCAGAAG 1020315 Query 172051 G 172051 | Sbjct 1020316 G 1020316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657859036678480