Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq15 223 1e-52 seq4 156 1e-32 seq2 114 4e-20 seq1 102 2e-16 >seq15 Length=1128247 Score = 223 bits (246), Expect = 1e-52 Identities = 585/881 (66%), Gaps = 19/881 (2%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || | ||| ||| ||| ||||| ||||| |||||| || | ||||| ||||| Sbjct 832493 GTACTCGATAATTTCAGTGCAAAGGTTGGAACTACGGATGGTACCGAGGTTCTTTTGGTT 832434 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 || | ||| |||||||||||||| || ||| ||||| |||| ||||| |||| || Sbjct 832433 GCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGC 832374 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGA 155809 || ||||| |||||| | | || ||||| |||| |||| ||| Sbjct 832373 CTCAAGAATGGCGTACCAGAGCTTCTGAGCCTTAATGGTCTTGCGACCCTTGCCCTCCTT 832314 Query 155810 CTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867 ||| || |||| || | ||| | | | ||||| ||||| || || || |||||| Sbjct 832313 CTCGTACTTTTCGTACAGAGCCTC--GAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGG 832256 Query 155868 CACTTATCGGGGCAAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCATAAAT 155924 |||| || |||||| | ||| | ||| | || || | | |||||| ||| || Sbjct 832255 CACTCATTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAA---CACGCTTCATGAAA 832199 Query 155925 ACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGA 155984 | |||| ||||| ||| ||||||||| | || |||||| | ||||| Sbjct 832198 AGATCAGGGATCCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGG 832139 Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044 ||||| || || || | ||| || | ||||| || ||||| || || || ||| Sbjct 832138 TTCTTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCA 832079 Query 156045 AAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101 ||| ||| | |||| || ||||| || |||||||||||||| || ||||||||| Sbjct 832078 AAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACA 832019 Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGAT 156161 | |||||||||| || |||||| || || || ||||| ||| || | || |||| Sbjct 832018 CGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTA 831959 Query 156162 GAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCA 156220 | || | | || | || || ||||||||||| | |||| || || || || || Sbjct 831958 GCACGGATACGGTGCACATTCAGACCAATACCACCAG-CCATCTTGGAGATCATGGCACA 831900 Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT-TGATAGTAGATAGC 156279 ||| | ||||| | | || || |||||| ||||| | ||| | | ||| ||| Sbjct 831899 GGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCATCCTTCATATCAACCAAGA-AGC 831841 Query 156280 ACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAA 156339 | || ||||| || | || || || || ||||| || || || | ||||| | | Sbjct 831840 AAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGA 831781 Query 156340 AATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTA-GACCCGTGA 156398 | |||| ||||||| || |||||||||| | ||| | || | |||| | Sbjct 831780 AGAACTTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAG- 831722 Query 156399 ATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATT 156458 |||| | ||| || | ||| ||| |||||||| ||||| |||||| || ||||| Sbjct 831721 ATACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATC 831662 Query 156459 CGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 || ||||||| || |||| ||| || || || || || Sbjct 831661 TTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTA 831621 >seq4 Length=3324183 Score = 156 bits (172), Expect = 1e-32 Identities = 425/645 (66%), Gaps = 8/645 (1%) Strand=Plus/Minus Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364 |||| || ||| ||| || || | ||||| |||||| || || || || || | Sbjct 1758538 CCGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGATGGAGAACATTCACTCCGAGACCT 1758479 Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACG 133424 | || || || || || |||||||| || ||| |||| | | || ||||||| Sbjct 1758478 ACTCCCTCCTCATCGACACCTACATCAAGGAGCCCGCCCAGCGAACCTACCTCTTCAACG 1758419 Query 133425 CCATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGG 133484 ||||| | |||| || || |||||| |||||||||| || ||||||||||| Sbjct 1758418 CCATTGACACTATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAGG 1758359 Query 133485 ACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttt 133544 | ||| | ||||| ||||||||||| || |||| || ||||| || || | Sbjct 1758358 ATAAGGACTCCTCCTTTGCCCAGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCT 1758299 Query 133545 tCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGT 133604 |||||||||| ||| |||||| || ||||| || ||||||||| | | || || ||| Sbjct 1758298 TCAGTGGTGCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGA 1758239 Query 133605 GTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTAC 133664 ||| || ||||| || || || | ||||||| |||||||| || |||||| | | Sbjct 1758238 CTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCCTGCCTCC 1758179 Query 133665 TTCACTCTAAATTAGAGCGACCACTCAAAAAGAATAAGATTGAAGAAATTATTAGAGAAG 133724 | |||||| | | || | | || ||| | | |||| | || || |||| || | Sbjct 1758178 TCCACTCTCACCTCAAGGGTCGTGCCAGCAAGCAGATGATTCAGGATATCATTACTGATG 1758119 Query 133725 CGGTTGAAATTGAGGTTGAATTTATCAATAGTGCTCTGCC--GTGCCGTTTAATTGGTAT 133782 | || |||||| || || ||| | ||||| || ||||| | | || || Sbjct 1758118 CCGTCACCATTGAGCAGGAGTTCCTCACTGAGGCTCTTCCCTGTGCC--CTCCTCGGCAT 1758061 Query 133783 GAATGATGTGCTGATGCAGCGTTATATTGAATTTGTAGCTGACAGATTGGCCGT-TCAGT 133841 ||| || || ||| ||| || ||||| || || ||||| | | || | || | Sbjct 1758060 GAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCTGATCG--TCTCCTTGTCGCT 1758003 Query 133842 -TAGGTGGGGATAAGATTTACGGTTCCGCCAATCCATTCGACTGGATGGAGAGCATTAGC 133900 | || || ||| | ||| || |||| || ||||||| ||||||| ||| | Sbjct 1758002 CTTGGCAACGAGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCC 1757943 Query 133901 ATTGAATCAAAGACTAATTTCTTCGAGGCGAGGGTAGCCGAATAC 133945 ||| ||||| || ||||||||| | | || ||||| ||| Sbjct 1757942 CTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGCCGACTAC 1757898 >seq2 Length=4552085 Score = 114 bits (126), Expect = 4e-20 Identities = 391/596 (66%), Gaps = 30/596 (5%) Strand=Plus/Minus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| | | || || ||||| | | ||||||| || | ||| | || || Sbjct 4039173 ATGAGTCCACAAATCTCGCAGACGTGGACACGGAAAGCATCCGACACCTCAAACAGACGC 4039114 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| ||| || |||||||| | ||||||||||||||| |||||||| ||||| Sbjct 4039113 TCCTTCAGGAAAGCAGCGGCACCGTGAGCAATCATACAATCACGTTCCATTTCTCCGAAT 4039054 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGA-GAT-TAACCATAG 251584 || ||||||||||| ||||| | ||||||| |||| || || || | ||| | | | | Sbjct 4039053 CGGAGACCACCATCACGAGCACGACCCTCGACAGGTTGTCGGGTCATGATCTGA--ACTG 4038996 Query 251585 GACC----GATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAG 251640 |||| | ||||| || ||| || | ||||| || |||||||||||| Sbjct 4038995 GACCACGAGCACGAGCG----TGAATCTTGTCGTCCACCATGTGACGAAGACGCTGGTAG 4038940 Query 251641 AATGCGGGACCGATGAAGA----TGCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATA 251696 | | || |||| ||| | || || | || || | |||||| || | || || Sbjct 4038939 TAGGTAGGTCCGAAGAACACCTGGGCACGGA-GCTTTCG---TCCAGTGTGACCATTGTA 4038884 Query 251697 CATAACTTCGTTTCCATTAGATTCATAACCAAG-TTTCT--GTAGCTCTGAAGCAATATC 251753 ||| || ||| || ||||| |||||| | ||||| | || ||||| | || Sbjct 4038883 CATGACCTCGAAACCTCGAGATTGGTAACCATGCTTTCTCAGAAGTTCTGAGACTGAAT- 4038825 Query 251754 ACCAATCTTGAATTTGCTAAAACTGGTGCCGTCTCCGTAAAGACCCATTTGAATCAACAC 251813 | | ||| | | || || |||| || | | ||| | | | || Sbjct 4038824 --CGACTGTGACATCAGTGAACGGCGTAGCGTCACCCTCCATACCTTCCAGTGTTGAAAC 4038767 Query 251814 TTTGCCTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGG 251873 |||| | ||| ||| ||| ||||| || ||||| || ||||| || || || Sbjct 4038766 CTTGCTAAGAAGACACTCAATCAAATGGGCAATTGTCATTCGCGATGGAATGGCGTGAGG 4038707 Query 251874 ATTGATGATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAAT 251933 ||||| ||||||||||| | || || || |||| |||||||||| | || || Sbjct 4038706 GTTGATAATGATGTCGGGAGTGAGACCTTCTCGGCTGAAAGGCATATCCTCCT-GTCGAT 4038648 Query 251934 AATGT--TTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||| || || || |||||||| |||||||||||| ||||| |||||||| Sbjct 4038647 -ATGTAACACCGATTGTACCCTTTTGACCGTGACGAGAAGCAAACTTGTCACCAAT 4038593 Score = 86.0 bits (94), Expect = 2e-11 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTT 233332 ||||||||||||||||||||||||||||||||||| || | || |||||||||||| Sbjct 4039095 GCACCGTGAGCAATCATACAATCACGTTCCATTTCTCCGAATCGGAGACCACCATCACGA 4039036 Query 233333 GACCTACCCTGGACTGTTTGACGAGTTA-AAACAGTTCTTGGACCCTGAGCACGATAATT 233391 | | ||||| ||| | ||| || || | | | | | |||||| |||||||| | Sbjct 4039035 GCACGACCCTCGACAGGTTGTCGGGTCATGATCTGAAC-TGGACCACGAGCACGAGCGTG 4038977 Query 233392 AATTTTATCTTTAACCATATG 233412 ||| || || | ||||| || Sbjct 4038976 AATCTTGTCGTCCACCATGTG 4038956 >seq1 Length=5319023 Score = 102 bits (112), Expect = 2e-16 Identities = 188/273 (69%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||||| | ||||| || || |||||||||||||| ||| | || || || || Sbjct 851328 TCTTCCAGAGCCTTGACCAATCGTCGCTGAATATAACCTGTTTCGGCAGTCTTGACCGCA 851269 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AG 302690 |||||||| ||||| | |||||| |||| || |||||||| | ||| | || || || Sbjct 851268 GTATCAATGAGACCTTCTCGACCAGCCATGGCGTGGAAGAAGAACTC-GCTGGGAGTGAG 851210 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750 || | | | ||| |||| || || ||||| || || || || | ||| |||||| Sbjct 851209 ACCACGGAGGTAAGAGTTCTCGACAAAGCCACGGGCTTCAGGTGAGTAATCGTCCTTGGT 851150 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 ||||| || | || | | || | ||| | || |||||||| || || || | || Sbjct 851149 GAAGTGAGGTAATGTGCGATACTTGAAACCGAACGGAATACGCTTGCCTTCGACAATTTG 851090 Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 ||| || | || | |||| || |||||||| Sbjct 851089 CTGACCGACAAGCGCAGTCATTTGAGAAATATT 851057 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/140 (75%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| | || ||||| |||||||| |||||||| Sbjct 852105 AGAATTTCCTTGAGACGCGGCACACCAAGAGTAACGTT---CTTGGACGACACACCAGCG 852049 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || ||||| || ||||| || | ||||||| |||||||||||| || || || | Sbjct 852048 AAATGGAAGGTGTTCAGTGTCATCTGAGTAGCAGGCTCACCAATAGACTGCGCAGCCAGA 851989 Query 301933 ATACCAACCATTTCTCCTGG 301952 | |||||||||||| || || Sbjct 851988 ACACCAACCATTTCACCAGG 851969 Score = 87.8 bits (96), Expect = 5e-12 Identities = 123/171 (72%), Gaps = 9/171 (5%) Strand=Plus/Plus Query 251475 GAAGC-GAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGAC 251533 ||||| | || ||||||| | ||||| ||||||||| |||||||| || | ||| |||| Sbjct 957120 GAAGCTGGGAAGCACCGTAGGCAATCAAACAATCACGTTCCATTTCTCCCAGACGTAGAC 957179 Query 251534 CACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACC----G 251589 ||||||| || | | ||| || | ||| ||||||||||| | | ||||| | Sbjct 957180 CACCATCTCGCGAACGACCTTCTGTAGGTTGACGAGTGAGGATGGCTCGGGGACCTCGAG 957239 Query 251590 ATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAG 251640 || ||| | || ||| || | ||||| |||||||| ||||||||| Sbjct 957240 ATCGAGAG----TGCATCTTGTCTTGCACCATGTGCTTGAGTCGCTGGTAG 957286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471809887215833