Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 9e-11 >seq2 Length=4552085 Score = 84.2 bits (92), Expect = 9e-11 Identities = 116/162 (72%), Gaps = 3/162 (2%) Strand=Plus/Minus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||| || ||||| || || |||||||| |||||||||| | ||||| Sbjct 4038751 CTCAATCAAATGGGCAATTGTCATTCGCGATGGAATGGCGTGAGGGTTGATAATGATGTC 4038692 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCAGGTACAATCAAACCAAT 309803 || | | || | || ||||||||||||| || | | | | ||| || Sbjct 4038691 GGGAGTGAGACCTTC---TCGGCTGAAAGGCATATCCTCCTGTCGATATGTAACACCGAT 4038635 Query 309804 AGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 || ||||||||| |||| | |||||||||||||||||||| Sbjct 4038634 TGTACCCTTTTGACCGTGACGAGAAGCAAACTTGTCACCAAT 4038593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951964171044152