Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-16 >seq1 Length=5319023 Score = 104 bits (114), Expect = 2e-16 Identities = 197/290 (68%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 || ||||| || || || || ||||| |||| | ||| | || | |||| | || Sbjct 984559 ACCAGACGGTTGTCGAAGTCCTCACCACCCAGGTGAGTGTCACCGGCAGTAGACTTGACC 984500 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | ||| | || || |||| || | |||| ||||| || || ||||| | ||| Sbjct 984499 TCGAAGATACCCTCCTCAATAGTAAGGAGAGACACATCGAAAGTACCGCCACCAAGATCG 984440 Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361 || || || || || || || || || |||||||| || |||| || ||| Sbjct 984439 AAGATCAGGACGTTGCGCTCGCCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCA 984380 Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421 ||||| || || || || |||| | ||| || ||||| || || || ||||| || Sbjct 984379 GCAGTAGGCTCGTTGATGATTCGGAGAACGTTGAGACCGGCGATGAGACCGGCATCCTTG 984320 Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 |||||||| | || |||||||| || || ||||| |||||||||||||| Sbjct 984319 GTGGCTTGACGCTGAGAATCGTTGAAGTAGGCAGGGACAGTAATAACGGC 984270 Score = 100 bits (110), Expect = 2e-15 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| || |||||| || |||| || |||||||| ||||||||||| | || |||||| Sbjct 849779 GGTAAGGAGGGTCGTCTTCGAGGTAACTTGATGGGTAAGCGTGTCGACTTTTCGGCACGT 849838 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || |||||| |||| | || || |||| | || |||||||| |||| || |||| Sbjct 849839 ACTGTCATTACTGGTGATGCCAACCTTTCTCTACACGAGGTTGGTGTCCCTCGCAGTATT 849898 Query 432408 GCGAAAAATCTTACTTTTGACGAAATTGTAACA 432440 || | | || || | | ||||| ||| ||| Sbjct 849899 GCCAGGACCCTCACCTATCCCGAAACTGTGACA 849931 Score = 86.0 bits (94), Expect = 5e-11 Identities = 182/272 (67%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 ||||| |||||||| | ||| || ||||| ||||| || || || || | | ||||| Sbjct 987022 ATACCGTTGGCATCAAGATCGAAGGTGACCTCAATCTGGGGAACACCACGGGGGGCAGGG 986963 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 ||||| || | | || | |||| || || || || ||| || || ||| Sbjct 986962 GGGATACCAGTGAGCTCGAACTTGCCCATCAGGTTGTTGTCCTTGGTGCGTTGACGCTCA 986903 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 |||||| | | |||||| ||| ||| ||| || || || | || | || || | Sbjct 986902 CCCTCGTAGACCTGGATAAGAACACCAGGTTGGTTGTCGGAGAAGGTGGAGAAGACCTCG 986843 Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680 || || || || || || ||||| | |||| |||||||| ||||||||||| Sbjct 986842 GACTTCTTGGTGGGGATGGTGGTGTTGCGGGGGATAAGCTTGGTCATCATACCACCAGCG 986783 Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATC 281712 || || | ||| ||||| || |||| |||||| Sbjct 986782 GTCTCGATACCGAGAGAGAGGGGAGCGACATC 986751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740610319828434