Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3 105 6e-18 >seq3 Length=3549891 Score = 105 bits (116), Expect = 6e-18 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 ||||||| || || |||||||||||||||| ||| || |||||| ||||| ||||| | Sbjct 3007332 TTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCCAGCTGCTTACCAG 3007273 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 |||| |||||||| ||||| || || || || || ||||| ||| || |||| Sbjct 3007272 CGAAGATAAGACGCTGCTGATCAGGGGGGATACCCTCCTTATCCTGAATCTTGCTCTTCA 3007213 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | || | ||| ||| | | || || || | || | || || ||||| ||||| | Sbjct 3007212 CGTTGTCGATAGTGTCGCTGGATTCGACCTCAAGAGTAATGGTCTTGCCAGTGAGAGTCT 3007153 Query 132108 TTATGAAAATCTGCAT 132123 | | |||||||||||| Sbjct 3007152 TCACGAAAATCTGCAT 3007137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476608763325240