Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq4 201 2e-45 seq15 102 1e-15 >seq4 Length=3324183 Score = 201 bits (222), Expect = 2e-45 Identities = 358/510 (70%), Gaps = 18/510 (4%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||| ||||| ||||| ||||| || |||||| | || | Sbjct 1758741 GATTTGGCAAATGTAC-AAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATC 1758683 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 || | || |||| ||||| ||| ||| | ||||||| ||| Sbjct 1758682 TCTCCAAGGATCTCCACG----ACTGGAACAACCGCCTGACTGCTGACGAGCAGTTCTTC 1758627 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 || || |||| || ||| ||||| ||| |||||||| || ||||||||| | Sbjct 1758626 GTCTCTCATATCCTTGC-TTTCTTCGCTGCCTCAGATGGCATTGTCAACGAGAACCTCGT 1758568 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 || || || | |||||||| | || ||||| |||| || ||||| |||||||| Sbjct 1758567 CGAGCGTTTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGCTTCTACGGCTTCCAGAT 1758508 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||| ||||| || |||||||| ||||| |||||||||||| ||||||| Sbjct 1758507 CATGATGGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATCAAGGA 1758448 Query 1456068 CCCGGTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAA 1456126 || | | || | ||| ||||||| |||||| ||||| | || | | | || | Sbjct 1758447 GCCCGCCCAG-CGAACCTACCTCTTCAACGCCATTGACACTATTCCCTGCATCCGAAAGA 1758389 Query 1456127 AGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCT 1456186 |||| |||||||| || |||||| | | | || ||| | ||||||| |||| || Sbjct 1758388 AGGCTGACTGGGCCATCCGATGGATCCAGGA-TAAGGACTCCTC-CTTTGCCCAGCGTCT 1758331 Query 1456187 CGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTG 1456245 ||| | ||| || | ||| ||||| ||||| ||| || ||| | | ||||| || Sbjct 1758330 CGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTG 1758271 Query 1456246 GCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||||||||| || |||||||||||||| Sbjct 1758270 GCTCAAGAAGCGTGGTCTCATGCCCGGTCT 1758241 Score = 86.0 bits (94), Expect = 9e-11 Identities = 168/243 (69%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 1456532 GAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGGC 1456591 || |||||| || ||| | ||||| ||| ||| | || || || ||| ||||| Sbjct 1758122 GATGCCGTCACCATTGAGCAGGAGTTCCTCACTGAGGCTCTTCCCTGTGCCCTCCTCGGC 1758063 Query 1456592 ATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCGG 1456651 |||||| | | |||||| ||||||||||| || ||||| || || || || | | Sbjct 1758062 ATGAACTCTGAC-CTCATGAAGCAGTACATTGAGTTC-GTCGCTGATCGTCTCCTTGTCG 1758005 Query 1456652 CGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGATC 1456711 | || ||| || ||||| |||| | | ||||||| ||| | |||||| ||| Sbjct 1758004 CTCTTGGCAACG-AGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATC 1757946 Query 1456712 TCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCCAAGGCCGGC 1456770 || || | |||||||||||||| |||||| || | || ||| ||| |||||||| Sbjct 1757945 TCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGCCGACTACCAGAAGGCCGGT 1757886 Query 1456771 GTC 1456773 ||| Sbjct 1757885 GTC 1757883 >seq15 Length=1128247 Score = 102 bits (112), Expect = 1e-15 Identities = 179/261 (69%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 ||||||||||| ||||||||||| || | || || || || ||||| || | || Sbjct 831795 CCCACGCTCTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGAT 831854 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| || || ||||| ||||| || || |||||| || || | |||||| Sbjct 831855 ATGAAGGATGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCC 831914 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104 ||| ||| || || || ||| | | ||| | || || | ||| | ||| | Sbjct 831915 AAGATGGCTGGTGGTATTGGTCTGAATGTGCACCGTATCCGTGCTACTGGCTCATACATC 831974 Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164 || || |||||||| || || || |||| || |||||||| || || ||| |||| Sbjct 831975 GCCGGTACCAACGGTACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACT 832034 Query 260165 GCGCGCTACGTCGACCAGTGC 260185 || || || ||||||||| || Sbjct 832035 GCTCGGTATGTCGACCAGGGC 832055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177771751198258