Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq15 244 1e-59 seq4 107 2e-18 seq1 89.7 6e-13 >seq15 Length=1128247 Score = 244 bits (270), Expect = 1e-59 Identities = 1148/1790 (64%), Gaps = 55/1790 (3%) Strand=Plus/Minus Query 110324 TCAAGACTGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTC 110383 |||| | |||||||||| || || |||| || || || |||||||| |||||| Sbjct 833449 TCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTC 833390 Query 110384 TTGAGTCCTTGTTTCCATGCGTACATA-TGCATAGAAGAGAGCTTGGACATCGTTGGACT 110442 ||||| || | ||||| || | || | |||||| | || |||| |||||| || Sbjct 833389 TTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATACTCGTGATCTTGCCCATCGTGGGGTC 833331 Query 110443 TTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCAT 110502 | |||| || ||||| ||| || ||||||||| || || | || ||||| Sbjct 833330 CTTCATGTGGATGTTCAGTGATTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCAT 833271 Query 110503 ATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATC 110562 | | ||| | | ||| |||||||| || ||| || ||||| ||| | Sbjct 833270 CTGGACGACCTGGCGCTGAGAAATCTCCCAAACAGTCTTATATAGGGCCTTGACATCGGC 833211 Query 110563 TGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATC 110622 ||||| | | || ||||| |||||||| | | | ||| | | ||||||| | Sbjct 833210 AGGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGC 833151 Query 110623 CTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAA 110682 | |||||| ||||| || | ||||| |||| || |||||||| || Sbjct 833150 ATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAA 833091 Query 110683 CTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATT 110742 |||||| ||||| | | | ||||||| || | ||||| || || ||||| || || Sbjct 833090 CTCACCAGCGAGAACACGGCGCTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTT 833031 Query 110743 ATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACG 110802 || |||| || || | || ||| || ||||| || || | | ||||||||||| Sbjct 833030 GTTGCCCAGAATCTGGGAAGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACG 832971 Query 110803 AAGACCCTTCTCCTTGATGCGTTCCTTGAGAACA---TCCCAGTCGTAGTTG--AGCTTG 110857 | ||| | ||||| ||||| ||| | |||||||| || | || | Sbjct 832970 GATACCGTGTGTCTTGAC---TTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGAG-G 832915 Query 110858 GTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAG 110917 | || || |||| ||||||||||||| || | || | || ||||||||||||| ||| Sbjct 832914 GCTTGACGTTCC-ACATGTCAAACTGGAGGATACCCTCAGAGGCGGGAGAACCCTTGAAG 832856 Query 110918 GTTTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCGTGATA 110976 || |||| || | | | ||||| | ||| | || |||| |||||||| Sbjct 832855 GTGGAGTAGGGGCCCTCCTCCTTAGCCAGCTGCACGGAG-GCAGTGAGGGCAGCGTGATA 832797 Query 110977 CATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCG 111036 ||||| |||||||| | || | ||| || || ||| || || | | | Sbjct 832796 AATGGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGG-GCATAC 832738 Query 111037 GCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCA 111095 ||| | || || |||| || || || |||||||| | |||||| |||| ||| |||| Sbjct 832737 GCAGAGCAAGGAAAGCATCGGCAAGGCCCTGAACACCAAGACCAATGGGTCGGTGGCGCA 832678 Query 111096 TATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGAT 111155 | ||| || || || || || || || || || |||| ||| || | Sbjct 832677 TGTTACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGT 832618 Query 111156 TTTTGGTAACAATCTTTGTGATTTCATG-AAGTTTTTCATAATCAAAAGTGCGAGTCTCT 111214 | |||||| || ||| | || || || || | | || | || || ||| Sbjct 832617 TGCGAATAACAACCTGACTGACCTTGTGCAACTTCTTGA-AGTCGTA---GCAAGCCTCA 832562 Query 111215 TCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCC 111271 || | ||| | || || | | || || | ||||| ||||| ||| || Sbjct 832561 TCGTAGTTGATGAAGGAGGGCAGAGACAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCG 832502 Query 111272 TTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTC 111331 | |||||| | |||||| || || | ||||||||| || || || | ||| Sbjct 832501 GGGGCACAGTACTCGATAATTTCAGTGCAAAGGTTGGAACTACGGATGGTACCGAGGTTC 832442 Query 111332 TTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCC 111391 |||||||| ||||| |||||| |||||||||||||||||| | || | || ||||| Sbjct 832441 TTTTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCA 832382 Query 111392 GTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTG-GCCC 111449 ||||| | | ||||| || | ||| | | || | | || ||||| ||| | || Sbjct 832381 GTCTGGGCCTCAAGAATGGCGTACCAGAGCTTCTGAGCCT----TAATGGTCTTGCGACC 832326 Query 111450 GT--CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGA 111507 | |||||| |||||||||| ||| || || || |||||||| || ||||| Sbjct 832325 CTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGC 832266 Query 111508 GAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTT 111567 ||| || || || | || || | || | ||| | ||| | ||||| ||||| Sbjct 832265 GAGGCCAGGGCACTCATTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTT 832206 Query 111568 CATGAAAAGGTCTGGAATCCACAGGG-ATGAAAAGAGATCTC-TACACCGAGCCTCTTCG 111625 ||||||||| || || ||||| |||| | | ||| || || | ||| || |||| || Sbjct 832205 CATGAAAAGATCAGGGATCCAAAGGGCAAGGAAA-AGGTCACGGGCACGGA-CCTCCTCC 832148 Query 111626 TCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGA 111685 | ||| ||||| || | ||||||||||| | || ||| | |||||| ||||| || Sbjct 832147 TTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGG 832088 Query 111686 TAGACTGCGATA------GATCCCTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGT 111738 |||| || | | | || ||| | | ||||| || | ||||| || || || Sbjct 832087 TAGATGGCAAAAGCACCGGGTCGCTTGTTGCCGCCC----TGGTCGACATACCGAGCAGT 832032 Query 111739 GGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA- 111796 | ||| || || |||||||| |||| || ||||| ||| ||| || || || ||| Sbjct 832031 GTTGTTGAAGACACGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGAT 831972 Query 111797 ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTT 111856 || ||| | | || | | | || | | || |||||||| |||||| ||| Sbjct 831971 GTATGAG--CCAGTAGCACGGATACGGTGCACATTCAGACCAATACCACCAGCCATCTTG 831914 Query 111857 GAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTG 111916 ||||| ||||| | | ||||| | ||||| || | || ||| ||||| | Sbjct 831913 GAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCATCCTTCATA 831854 Query 111917 GCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGT 111976 | | | ||||||| |||| || || || || || ||||||||||| || || Sbjct 831853 TCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGG 831794 Query 111977 GTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAA 112034 | || || ||| | | |||| |||||| | ||||||||||||||| || | Sbjct 831793 GAAGCATGCGTGA--AGAACTTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCGA 831736 Query 112035 TGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGG 112084 | || || || ||| || | | || ||||||| ||||| ||| ||| Sbjct 831735 TATCATCACCCCAGATACCAACAGACACACGCATGATCATGTGCTGAGGG 831686 >seq4 Length=3324183 Score = 107 bits (118), Expect = 2e-18 Identities = 329/503 (65%), Gaps = 18/503 (4%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| | || |||||||| |||||||||||||| || ||||| ||||| ||||| Sbjct 1757899 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 1757958 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 122485 ||||| || || || | || || | | | | || |||| |||| Sbjct 1757959 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGGA 1758013 Query 122486 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGT 122545 ||||||| | || |||||||||||| ||| ||||||||||| |||| |||| Sbjct 1758014 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGG 1758073 Query 122546 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 122605 ||| || || || || || |||| | | |||||| || || || | | ||| Sbjct 1758074 CACAGGGAAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTAATGATAT 1758133 Query 122606 CGTGGATAGTTTCGGTAGTGGGTCTA---TTACGCAAAGTCTTGAAGAGCTCCACGGCAA 122662 | || || | | | ||| | | || | || | || ||| || ||||| Sbjct 1758134 CCTGAATCATCTGCTTGCTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCAA 1758190 Query 122663 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCA 122722 | || ||| |||||||| || || || || || || || ||||| ||||| |||| Sbjct 1758191 AGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCGGGCA 1758250 Query 122723 TGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCT 122782 ||||||| |||||||| | ||| | |||| | ||| | || |||||||||||||| Sbjct 1758251 TGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATACCCT 1758310 Query 122783 CCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACCAT 122841 | || || || |||| || || | ||| |||||| ||| ||| | | | |||| Sbjct 1758311 CAACGGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAG-GAGTCCTTATCCTGGATCCAT 1758369 Query 122842 TTCATTGCCCATTTCGCCTTCTT 122864 || ||||| | |||||||| Sbjct 1758370 CGGATGGCCCAGTCAGCCTTCTT 1758392 >seq1 Length=5319023 Score = 89.7 bits (98), Expect = 6e-13 Identities = 139/198 (70%), Gaps = 3/198 (2%) Strand=Plus/Minus Query 164605 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 164664 |||| || |||| || ||||| ||||||||| |||||| ||| | || || | Sbjct 2430239 ATGGACGCATTGCCCCTCGATCGGGTCTCGCTTCCAAGCATTTCATTGACACAGGCGCTG 2430180 Query 164665 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 164724 |||| || ||| |||| ||| ||| | ||||| ||| | || ||||| || || Sbjct 2430179 GTGTCATCGATGCCGATTATCGCGGTCAGGTCAAGGTCCTGCTTTTCAACCATAATGAAT 2430120 Query 164725 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGCTGTGAAA 164784 ||||||||||| ||| | || || ||||| || |||||||| || |||||| | | Sbjct 2430119 CCGACTTTGAGGTGAAGGAGGGCGACCGCATTGCTCAACTTGTTCTGGAGCGCATCTACA 2430060 Query 164785 CACCCGA---TGTGGAGG 164799 | ||||| |||||||| Sbjct 2430059 CCCCCGAGGTTGTGGAGG 2430042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628028789186400