Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq15 235 7e-57 seq4 181 1e-40 seq5 84.2 3e-11 >seq15 Length=1128247 Score = 235 bits (260), Expect = 7e-57 Identities = 1099/1720 (64%), Gaps = 45/1720 (3%) Strand=Plus/Minus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 |||||||||| || || |||| || || ||||||||||| || |||||||| | Sbjct 833442 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTCTTGAGGC 833383 Query 117865 CCTGCTTCCAGGCATACATA-TGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATG 117923 | |||||||| | | || | ||||| | | |||| | || || | |||| Sbjct 833382 CAAGCTTCCAGCC-TGCAAAGTGCATACTCGTGATCTTGCCCATCGTGGGGTCCTTCATG 833324 Query 117924 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 117983 || ||||| |||||| ||||| |||||| || ||||| || ||||| | | Sbjct 833323 TGGATGTTCAGTGATTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCATCTGGACG 833264 Query 117984 ACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATA 118043 || | | || ||||| |||||| | || ||| ||| | ||| | ||||| Sbjct 833263 ACCTGGCGCTGAGAAATCTCCCAAACAGTCTTATATAGGGCCTTGACATCGGCAGGGATG 833204 Query 118044 TCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGAC 118103 | || || || ||||| ||| | | | ||| | | ||||||| | | ||| Sbjct 833203 TTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGAC 833144 Query 118104 CAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCC 118163 || ||||| || | || |||| | || |||||||| |||||||| Sbjct 833143 CACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCA 833084 Query 118164 GCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCC 118223 ||||| || | | | |||||||||| ||||| ||||| |||||||| ||||| ||| Sbjct 833083 GCGAGAACACGGCGCTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCC 833024 Query 118224 AAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCC 118283 | || |||| || ||| || ||||| || || | ||| || |||||||||| ||| Sbjct 833023 AGAATCTGGGAAGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACGGATACCG 832964 Query 118284 TTTTCCCTAATGCGTTC-CTTGA-GAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT 118341 | | | | | | | | || || ||| |||||||| || | | || | | Sbjct 832963 TGTGTCTTGA--CTTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGAGGGCTTGACGT 832906 Query 118342 GCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATG 118401 |||||| ||||||||||||||||| | || || || || |||| || || || | Sbjct 832905 TCCACATGTCAAACTGGAGGATACCCTCAGAGGCGGGAGAACCCTTGAAGGTGGAGTAGG 832846 Query 118402 GGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTT 118458 ||||||| ||| |||| | ||||| || |||||| |||||||| || || | Sbjct 832845 GGCCCTCCTCCTTAGCCAGCTGCACGGAG---GCAGTGAGGGCAGCGTGATAAATGGTCT 832789 Query 118459 CAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-A 118517 |||| || | || | | |||||| || || || | | || || | | Sbjct 832788 CAAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATACG-CAGAGCA 832730 Query 118518 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 118577 | || |||| || || || || ||||| || ||||| || || || | ||| ||| Sbjct 832729 AGGAAAGCATCGGCAAGGCCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTG 832670 Query 118578 TTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTG 118637 || ||||| || || || || ||| |||||| | | | || || || | Sbjct 832669 TTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATA 832610 Query 118638 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TG 118694 ||||||| ||| | || | ||| | | | || | || || ||| || | || Sbjct 832609 ACAACCTGACTGACCTTGTGCAACTTCTTGAAGTCGTA---GCAAGCCTCATCGTAGTTG 832553 Query 118695 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 118754 | | || || | | || || || || || |||| | ||| || || | Sbjct 832552 ATGAAGGAGGGCAGAGACAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCGGGGGCACAG 832493 Query 118755 TACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 118814 ||||| |||||||| ||||| | ||| ||||| ||||| || | ||||||||| || Sbjct 832492 TACTCGATAATTTCAGTGCAAAGGTTGGAACTACGGATGGTACCGAGGTTCTTTTGGTTG 832433 Query 118815 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 118874 ||| ||| || ||||||||||| |||||| |||| | || ||||| || |||| | Sbjct 832432 CTCTTGCGGTTGCAAGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCC 832373 Query 118875 TTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGC---CCCTC 118930 | ||||| || | ||||| | || | ||| | | ||| ||| | | ||||| Sbjct 832372 TCAAGAATGGCGTACCAGAGCTTCTG-AGC---CTTAATGGTCTTGCGACCCTTGCCCTC 832317 Query 118931 TTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGG 118990 | |||||||||| ||| || || || ||||| || || | || | ||| || || Sbjct 832316 CTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGG 832257 Query 118991 TGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAG 119050 || || ||||| | || | ||| | ||| || ||||| ||||||||||| || Sbjct 832256 GCACTCATTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAAAG 832197 Query 119051 GTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATT 119110 || |||||||| || || ||| || || || || | || || | || || || Sbjct 832196 ATCAGGGATCCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTT 832137 Query 119111 GAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGAT 119170 ||| | || | || || | || ||| | |||||| || || ||||| | || | Sbjct 832136 CTTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAA 832077 Query 119171 TG-AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATAC 119224 | || | ||| | | || |||||| ||||||| |||||| ||| || || Sbjct 832076 AGCACCGGGTCGCTT--GTTG-CCGCCCTGGTCGACATACCGAGCAGTGTTGTTGAAGAC 832020 Query 119225 ACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTA 119282 ||||||||| |||| | ||||| ||| || || || || ||| || ||| | | Sbjct 832019 ACGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCC--A 831962 Query 119283 TTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCG 119342 | || | || | ||| | | || ||||||||| || ||| ||| ||||| || Sbjct 831961 GTAGCACGGATACGGTGCACATTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCA 831902 Query 119343 CACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAG 119402 || | ||||| | ||||||| || || || |||| |||| | | | | |||| Sbjct 831901 CAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCATCCTTCATATCAACCAAGAAG 831842 Query 119403 CAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATG 119462 || |||| ||| ||| || || || || |||||||| || || | || || || Sbjct 831841 CAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTG 831782 Query 119463 AACATACCTTG--GGACATCTTGTCGTAGGTCTCCAAGAC 119500 | | | |||| |||||| | ||| ||||||||||| Sbjct 831781 A--AGAACTTGCTAGACATCAGATTGTATGTCTCCAAGAC 831744 >seq4 Length=3324183 Score = 181 bits (200), Expect = 1e-40 Identities = 532/811 (66%), Gaps = 13/811 (2%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| |||| ||||||||||||||||| ||||| ||| | | | ||| |||||||| Sbjct 1757899 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 1757958 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | | || | | | || | |||| |||||||| Sbjct 1757959 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-CCAAGAGCGACAAGGAGACG 1758017 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 ||| | |||| |||||||||||| ||| || |||||||| |||| |||| ||| Sbjct 1758018 ATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGGCACA 1758077 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 || || || || || |||| ||| ||||||| || || || | ||| | || Sbjct 1758078 GGGAAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTAATGATATCCTG 1758137 Query 129967 AATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023 ||| ||| | ||| || | | ||| | || | || ||| || |||||| || Sbjct 1758138 AATCATCTGCTTGCTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCAAAGTC 1758194 Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083 ||| |||||||||||||| |||||||| || || ||||| |||||| |||||||| Sbjct 1758195 AGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCGGGCATGAG 1758254 Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 ||| |||||||| | |||||| || | || | ||| ||||||||| ||||| || Sbjct 1758255 ACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATACCCTCAAC 1758314 Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCAT 130203 ||||| |||| |||||||| ||||||||| | ||| | | ||| || Sbjct 1758315 GGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGGATCCATCGGAT 1758374 Query 130204 CGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTT 130263 ||||| | ||||| || ||| || || | || | || || | ||||| | | Sbjct 1758375 GGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATAGTGTCAATGGCGTTGAAGAGGTAGGT 1758434 Query 130264 CTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGAC 130323 | | || || |||||||| | || ||||| || || || ||| || | Sbjct 1758435 TCGCTGGGCGGGCTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAGTGAAT 1758494 Query 130324 CAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCAT 130382 | | ||| || | ||| | ||||||| | || || ||| ||||| ||||| Sbjct 1758495 GTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGGATCTGGACCTCGC 1758553 Query 130383 CTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCA 130442 | ||| | || ||||| ||||| ||||| || |||| || || || | Sbjct 1758554 CACTGAAACGCTCGACGAGGTTCTCGTTGACAATGCCATCTGAGGCAGCGAAGAAAGCAA 1758613 Query 130443 GGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGAT 130499 |||||| | ||| ||| || | | ||| || | |||||||||| |||| Sbjct 1758614 GGATATGAGAGACGAAGAACTGCTCGTCAGCAGTCAGGCGGTTGTTCCAGTCGTGGAGAT 1758673 Query 130500 CCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||| |||||||| | |||||| |||||||| Sbjct 1758674 CCTTGGAGAGATCAATCTCCTCAGCAGTCCA 1758704 >seq5 Length=3271200 Score = 84.2 bits (92), Expect = 3e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 180879 CAACTTGGCACCGTAGCCATTGCGTCCACCAACAATTCTCTTCTTGTTGTCATCGTAGTT 180938 || |||||||||||| || ||||| |||||||| || |||||| || ||| ||| |||| Sbjct 315593 CAGCTTGGCACCGTAACCGTTGCGACCACCAACGGTTTTCTTCTCGTCGTCGTCGAAGTT 315652 Query 180939 TGTACTCGTGAGGAGGTGACCAAAGGTAAGTTCTGGATTCCAAATATCCTCCTTTTCGTG 180998 | || || | || || || ||| |||| || ||| | | || | |||||||||||| Sbjct 315653 GGAACCCGCCAACAGATGTCCGAAGATAAGCTCAGGAATGTAGATCTTCTCCTTTTCGTG 315712 Query 180999 CATA 181002 ||| Sbjct 315713 AATA 315716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618432038250040