Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq15 221 1e-52 seq4 143 3e-29 >seq15 Length=1128247 Score = 221 bits (244), Expect = 1e-52 Identities = 1135/1786 (64%), Gaps = 47/1786 (3%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||| ||| | | ||||| || || || || || || Sbjct 831686 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 831745 Query 104281 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 104338 ||||||||||||| | |||||| |||| | | ||| || || | || || ||| Sbjct 831746 CTTGGAGACATACAATCTGATGTCTAGCAAGTTCT--TCACGCATGCTTCCCCCACGCTC 831803 Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398 |||||||| || || || |||||| |||| ||||||| | | | | ||||| Sbjct 831804 TTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGAT 831863 Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458 ||| || | || ||||| | ||||| | | ||||| ||||| ||| |||| Sbjct 831864 GACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCT 831923 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-A 104516 || |||||||| || | | || | | | || | | ||| || ||| || | Sbjct 831924 GGTGGTATTGGTCTGAATGTGCACCGTATCCGTGCTACTGG--CTCATACATCGCCGGTA 831981 Query 104517 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 104576 | || ||| ||| ||||| || |||| |||||||| || || ||| ||| || || | Sbjct 831982 CCAACGGTACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGGT 832041 Query 104577 ATGTAAATCAAGCTGGGCGTCGA-AAGGGATC------TATCGCAGTCTATCTTGAGCCA 104629 |||| | || ||||| | | ||| || | | | || |||| || ||||| Sbjct 832042 ATGTCGACCA----GGGCGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCT 832097 Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCG 104689 |||||| | ||| || | ||||||||||| | ||| ||||| ||| | ||||||| Sbjct 832098 TGGCACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTC 832157 Query 104690 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749 || ||| || || ||| || || ||||| || ||||| ||||||||| | ||||| Sbjct 832158 CGTGCCCGTGACCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAA 832217 Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG 104809 ||| || | ||| | || | || || | || ||||| ||| |||| | Sbjct 832218 AAGAACGGTGACTGGACACTGATGTGCCCCAATGAGTGCCCTGGCCTCGCCGACTGCTAC 832277 Query 104810 GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GA 104867 || |||||||| || || || ||| ||||||||| |||| ||| | | | | || || Sbjct 832278 GGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGA-GAAGGAGGGCAAGGGTC-GCAAGA 832335 Query 104868 CGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926 | | ||| | || | | ||| | || ||||| || | || || ||||| || | Sbjct 832336 CCATTAAGGCT-CAGAAGCTCTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAAC 832394 Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986 |||| |||||| ||||| || || || |||| ||||| || |||||||| | ||| Sbjct 832395 CCATTCATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACC 832454 Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046 ||| |||||||| || || || ||||| | || | | | || ||| ||| Sbjct 832455 ATCCGTAGTTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCCCCCGACGAGGTCGCT 832514 Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT 105106 || || ||||| || || | |||| ||| | | || || | || || Sbjct 832515 GTCTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCAT-----CAACTACGATGAGGCTT 832569 Query 105107 -----GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAG 105161 || | | || | ||| | || | | ||| | ||||| |||| Sbjct 832570 GCTACGACTTCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGA 832629 Query 105162 TTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTC 105221 | || ||| || ||||| || || ||||| || ||| ||| | ||||| | Sbjct 832630 TCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGAC 832689 Query 105222 CAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTT 105280 | |||||||| ||||||||||| || || |||| ||| || || || || | || Sbjct 832690 CCATTGGTCTTGGTGTTCAGGGCCTTGCCGATGCTTTCCTTGCTCTG-CGTATGCCCTTC 832748 Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340 || || ||| || || |||| || || ||||||||||| |||||||| || Sbjct 832749 GAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTTGAGACCATTTATCACGCTGCC 832808 Query 105341 CTTGAGGC--GAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 105398 || || || | || |||| ||| || || || || ||||| |||||| Sbjct 832809 CTCACTGCCTCCGTGC--AGCTGGCTAAGGAGGAGGGCCCCTACTCCACCTTCAAGGGTT 832866 Query 105399 CTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACT 105458 |||| || || | || | || || ||||| |||||| | | || || | || Sbjct 832867 CTCCCGCCTCTGAGGGTATCCTCCAGTTTGACATGTGGAACGTCAAGCCCTCTGACCTCT 832926 Query 105459 ACGACTGGGAAGCTC-TCAAG-GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCT 105516 |||||||| ||| || || | | | ||||| | ||| | ||||||||||| || Sbjct 832927 GGGACTGGGAGACTCTTCGAGAGGAAG--TCAAGACACACGGTATCCGTAACAGTCTGCT 832984 Query 105517 CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 105576 | | ||||| ||||| || ||| || | || || |||| || || || ||||| || Sbjct 832985 CCTTGCTCCTATGCCTACTGCCAGTACTTCCCAGATTCTGGGCAACAACGAGTGCTTCGA 833044 Query 105577 ACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 105636 |||||||| | || ||||| | | | | ||||| || ||||| | ||||||| Sbjct 833045 GCCCTACACCTCCAATATCTACCAGCGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAA 833104 Query 105637 CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCT 105696 | || | | ||||| || || ||||| |||||| | | ||||||| | | Sbjct 833105 CCCCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCG 833164 Query 105697 CATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAA 105756 ||| | | | |||||||||||| || ||| | || || || | ||| Sbjct 833165 CATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGC 833224 Query 105757 GTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCG 105816 | || || |||||||| || | | ||| | | ||||| || ||||| Sbjct 833225 CCTATATAAGACTGTTTGGGAGATTTCTCAGCGCCAGGTCGTCCAGATGGCTGCTGATCG 833284 Query 105817 TGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGTC 105876 ||| |||||||||||| ||| |||| || |||| | || |||||| Sbjct 833285 AGGTGCCTTCATTGATCAGTCCCAATCACTGAACATCCACATGAAGGACCCCACGATGGG 833344 Query 105877 CAAGCTCTCTTCTATGCACATGTACA-GTTGGAAGAAGGGTCTCAAAACGGGGATGTATT 105935 |||| || | ||||||| | | || | |||||| || ||||| || || ||||| | Sbjct 833345 CAAGATCACGAGTATGCAC-TTTGCAGGCTGGAAGCTTGGCCTCAAGACCGGCATGTACT 833403 Query 105936 ACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGA 105981 |||| || | |||| || || |||||||||| | |||| Sbjct 833404 ACCTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCACTGTTGA 833449 >seq4 Length=3324183 Score = 143 bits (158), Expect = 3e-29 Identities = 179/243 (74%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| | ||||| | || |||| || || | |||||| || || ||||| || Sbjct 1758428 CTCTTCAACGCCATTGACACTATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGA 1758369 Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832 ||| | | | || | | | | ||||||| |||| ||| | || || || ||||| Sbjct 1758368 TGGATCCAGGATAAGGACTCCT-CCTTTGCCCAGCGTCTCGTTGCCTTCGCTGCCGTTGA 1758310 Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892 ||||||||||||| |||| ||||| | |||| | |||||||||||||| |||||||| Sbjct 1758309 GGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCAT 1758250 Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 94952 ||| ||||| |||||||||||||| ||||||||||||||||| || ||| || || Sbjct 1758249 GCCCGGTCTGACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTT 1758190 Query 94953 TGC 94955 ||| Sbjct 1758189 TGC 1758187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257818079160