Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq15 206 4e-48 >seq15 Length=1128247 Score = 206 bits (228), Expect = 4e-48 Identities = 439/650 (68%), Gaps = 4/650 (1%) Strand=Plus/Minus Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATA 76609 ||||| || ||||| || ||||||| || ||| ||||| | | | ||| || ||||| Sbjct 832261 CCAGGGCACTCATTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATG 832202 Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669 || |||||||| ||||| || |||| || || || |||| | || || || || Sbjct 832201 AAAAGATCAGGGATCCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCG 832142 Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729 ||||| ||||| |||||||| | | |||||| ||||| || || || || || Sbjct 832141 TGGTTCTTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATG 832082 Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789 || | | |||| ||||| || || || ||||| || | ||| | |||||||| || | Sbjct 832081 GCAAAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACATACCGAGCAGTGTTGTTGAAG 832022 Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849 || | | ||| |||| || || || |||||||| || || || | || || ||| Sbjct 832021 ACACGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCA 831962 Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909 ||||| ||| | | || || || || || ||||| || ||||| | ||| Sbjct 831961 GTAGCACGGATACGGTGCACATTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCA 831902 Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAG-AAGAAA 76968 ||| || | || || ||||| ||||| ||||| |||||| |||| | || ||||| Sbjct 831901 CAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCATCCTTCATATCAACCAAGAAG 831842 Query 76969 ACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGT 77028 || | |||| ||| | ||| || || ||||| || | || || || ||||| || Sbjct 831841 CAAGAT-GACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGT 831783 Query 77029 GAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC-CCATTGAT 77087 ||| | || ||| | ||||||||||| || | ||| || ||||| || Sbjct 831782 GAAGAACTTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCA 831723 Query 77088 GAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTA 77147 | || || |||| |||||||| | ||| |||||||| || || ||| ||||| | | Sbjct 831722 G-ATACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAA 831664 Query 77148 TTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 77197 | || | | ||||||| |||||||| || || ||||| || | |||| Sbjct 831663 TCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTAT 831614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712930755122880