Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20nygamai_20[genbank_20GCA_5F001262555.1_202015-08-06] 409 sequences; 51,615,029 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq3 176 9e-39 seq4 159 7e-34 seq7 147 5e-30 seq6 89.7 1e-12 >seq3 Length=3549891 Score = 176 bits (194), Expect = 9e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| ||||| || || ||||| | ||| || || || |||||||| |||| Sbjct 3006625 CCACCACGGAGGCGGAGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAG 3006566 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| || || || ||||| || ||||| ||||| ||||| || Sbjct 3006565 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGG 3006506 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||| || ||||| | || ||| | ||||||||||| || | ||||| Sbjct 3006505 ATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCGGATGACTCGACC 3006446 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || |||| ||||| ||||| |||||||| Sbjct 3006445 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 3006399 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || ||||| | || ||| || || ||||||||||| || Sbjct 3006908 ACCACCACGGAGGCGGAGGACGAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGC 3006849 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||| || || ||||| || || |||||||||| || || |||||| || Sbjct 3006848 AAGAGTTCGGCCGTCTTCGAGTTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGG 3006789 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| || ||||| | || || | ||||| || || || | ||||| Sbjct 3006788 AATACCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCGATGGTATCGGATGACTCGAC 3006729 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTT 283101 || || ||||| ||||| || || | ||||| |||| ||| | |||| Sbjct 3006728 CTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGACTATGAGGATTT 3006679 Score = 154 bits (170), Expect = 3e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | || ||| || |||||||||||||| | Sbjct 3007136 ACCACCACGAAGACGTAGAACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGA 3007077 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || || |||||||| ||||| || || |||||||| | || ||||| || || Sbjct 3007076 AAGAGTTCGACCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCGGGAGG 3007017 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||||||||||||||||||| ||||| || || |||| || || || || | |||| Sbjct 3007016 AATACCCTCCTTGTCTTGGATC-TTGCTCTTCACATTATCAATGGTATCGGATGACTCGA 3006958 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| ||||| || ||||| || || | ||||| || || || ||||| Sbjct 3006957 CTTCCAGAGTAATGGTCTTTCCAGTAAGGGTCTTGACAAAGATTTGCAT 3006909 Score = 129 bits (142), Expect = 1e-24 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931 ||||| || || || || || || || | || || || |||||||||||||| | Sbjct 3007363 CCACCGCGAAGTCGGAGAACGAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTC 3007304 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| ||||| || || || || || || ||||| | ||| || || ||| || Sbjct 3007303 AAG-GTGCGACCATCTTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGG 3007245 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||||||||||| || || ||||| ||| || ||| | ||||||||||| | ||||| Sbjct 3007244 GATACCCTCCTTATCCTGAATCTT-GCTCTTCACGTTGTCGATAGTGTCGCTGGATTCGA 3007186 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || ||||| || ||||| || || | |||||| ||||| |||||||| Sbjct 3007185 CCTCAAGAGTAATGGTCTTGCCAGTGAGAGTCTTCACGAAAATCTGCAT 3007137 >seq4 Length=3324183 Score = 159 bits (176), Expect = 7e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || ||||| || ||||| || | ||| || || |||||||||||||| Sbjct 2716477 ACCACCGCGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCT 2716536 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || || ||||| | || || ||||| || Sbjct 2716537 CAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGGGG 2716596 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || ||| | ||||| ||||| |||| || || Sbjct 2716597 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 2716656 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||||||||| ||||| | ||||| ||||| |||||||| || Sbjct 2716657 CTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 2716707 Score = 113 bits (124), Expect = 9e-20 Identities = 157/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| | || ||| |||| || || |||||||||| |||| |||||| Sbjct 1758103 AGGAGTTCCTCACTGAGGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGA 1758044 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 ||| || || || ||||| ||||||||| | | || || || || ||||||| || | Sbjct 1758043 AGCAGTACATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTCT 1757984 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | || ||| |||||||||| || |||||| ||| || || || || || |||| Sbjct 1757983 ACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACT 1757924 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||| |||||||| ||| || || | | ||||||| Sbjct 1757923 TCTTCGAGAAGCGTGTTGCCGACTACCAGAAGGCCGGTGT 1757884 >seq7 Length=2761656 Score = 147 bits (162), Expect = 5e-30 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || || ||||||||||| || || || || || |||||| Sbjct 1020314 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGATC 1020255 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | || ||||||||| || || ||||||||||| |||||||| | || || | ||| Sbjct 1020254 AGTCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1020195 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || |||||||| | ||||| ||||| ||||| ||||| ||||||| ||||| ||||| Sbjct 1020194 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 1020136 >seq6 Length=3118486 Score = 89.7 bits (98), Expect = 1e-12 Identities = 133/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 315651 GTGACTAATCACCACCACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAG 315710 |||| |||| | | || ||||| |||| ||||| || |||| | || ||||||||| Sbjct 1924741 GTGAGTAATGATGATGACACCACCCTCGAACTTCTTCAGGGCCTTGGACAGGGCACCGAG 1924800 Query 315711 ACTCTCGCGGTCCACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCA 315770 | || || || | | ||||||| ||||| ||||| ||||| | || ||| | ||||| Sbjct 1924801 AGAGTCACGATCGAGATAGTTGGTAGGCTCGTCAAGGACGATAAGATGAGGTCGCTGCCA 1924860 Query 315771 TAGAGCG-GCGCCGATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAG 315829 ||||| ||| | | || ||| | || ||||||||||| ||||| ||||||| Sbjct 1924861 -AGAGCAAGCGGCAAGGACAGTCTTGACACGCTGACCACCAGACAGACCACGCATGCGAG 1924919 Query 315830 AATGAG 315835 | |||| Sbjct 1924920 AGTGAG 1924925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046733714759486