Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F000733055.2_202015-06-08] 1,166 sequences; 50,550,233 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq22 89.7 4e-13 >seq22 Length=541522 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 || || |||||| | ||| | |||||| |||||||||| |||||||| ||||| || Sbjct 203601 GACAAGGAGGGTATTCCTCCCGATCAACAGCGACTTATCTTCGCTGGCAAGCAACTTGAG 203660 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 ||| |||| | |||| ||||| |||||||||||||||||||| || |||| | Sbjct 203661 GATGGCCGAACTCTTTCCGACTACAACATTCAGAAGGAATCTACTCTCCACTTGGTTCTC 203720 Query 22047 CGTTTACGAGGAGG 22060 ||| | || || || Sbjct 203721 CGTCTTCGTGGTGG 203734 Score = 87.8 bits (96), Expect = 1e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 21907 ATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCT 21966 || ||||| ||| ||| ||||| |||||| | ||| |||| ||| | || |||| Sbjct 203353 ATGTTAAGTCAAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAGCAGCGCCTGATCT 203412 Query 21967 TTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAAT 22026 ||||||| || ||||| ||||| ||| | ||||| ||||| ||||||||||||| Sbjct 203413 TTGCTGGAAAGCAACTCGAAGACGGCCGAACCCTTGCCGACTACAACATTCAGAAGGAAT 203472 Query 22027 CTACTCTTCAT 22037 |||| |||||| Sbjct 203473 CTACCCTTCAT 203483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358119710822764