Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20[genbank_20GCA_5F000733055.2_202015-06-08]
1,166 sequences; 50,550,233 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq10 369 7e-97
seq14 327 2e-84
>seq10
Length=724679
Score = 369 bits (408), Expect = 7e-97
Identities = 597/848 (70%), Gaps = 22/848 (3%)
Strand=Plus/Minus
Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368
|||||||||||||| || ||| |||||| || ||||||||||| || |||||||
Sbjct 716021 ATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTTTCCAAGGAT 715962
Query 42369 ACGGCCGGCTGGGAGTCA-----CTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACATAC 42423
| |||| | || ||| ||| | || |||| ||| || |||| |
Sbjct 715961 CTCCATGACTGGAA--CAACCGCCTGACTGCCGATGAGCAGTTCTTCGTCTCTCACATCC 715904
Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483
| || |||||||| || ||||| || || ||||| |||||||| | | | ||||
Sbjct 715903 TTGCTTTCTTCGCTGCGTCTGATGGTATTGTCAACGAGAACCTCGTCGAGCGATTCAGTG 715844
Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543
||||| ||| | ||||| || |||||||||||||||||||| || ||||||
Sbjct 715843 GCGAGGTCCAGATCCCCGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGATGGAGAACA 715784
Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGAGC 42600
| ||||| ||| ||| || ||||||| |||| |||||| ||| |||| | |||
Sbjct 715783 TCCACTCCGAGACCTACTCC---CTGCTCATTGACACCTACATCAAGGAGCCCGCCCAGC 715727
Query 42601 GTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGG 42660
| | | || || || ||||| ||||| || ||||||||| |||||||| |||||||
Sbjct 715726 GAACCTACCTCTTTAACGCCATTGAGACCATCCCCTGCATCCGAAAGAAGGCCGACTGGG 715667
Query 42661 CGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720
| || |||||| || | ||| | | || | | || | || || || || | |
Sbjct 715666 CCATCCGATGGATCCAGGATAAGGACTCCTCCTTTGCCCAGCGTCTCGTTGCTTTCGCTG 715607
Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-G 42779
| || ||||| ||||||||| || ||||||||||| ||||||||||||||| || |
Sbjct 715606 CTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTG 715547
Query 42780 GTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCAT 42839
|| || |||||||| || |||||||| ||||| |||||| | || ||||| || ||
Sbjct 715546 GTCTC-ATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGTCTTCAC 715488
Query 42840 AGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCTCGAAGGAGCG 42898
| ||||||||||||||||| ||| |||||| ||| | ||| | ||| ||
Sbjct 715487 ACTGACTTTGCCTGCCTCCTCCACTC---TCACCTCAAGGGTCGTGCCAGC-AAGCAGAT 715432
Query 42899 GGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCT 42958
| ||| || ||||| || || ||||| || ||| ||||||||||||| || | ||
Sbjct 715431 GATCCAGGATATCATTACTGATGCCGTCACCATTGAGCAGGAGTTCCTCACTGAGGCTCT 715372
Query 42959 GCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGC 43018
||| |||| ||||||||||| ||||||||| ||||||| ||| ||||||
Sbjct 715371 TCCCTGCGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGC 715312
Query 43019 CGACCATCTCC-TGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCG 43077
|| | ||||| ||| | ||| || | | ||||| | | ||||||||
Sbjct 715311 TGATCGTCTCCTTGTCGCGCTTGGCAACGAGAAG-GTTTACAAGGCCACCAACCCCTTCG 715253
Query 43078 ACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCG 43137
|||| |||||||||||||| | | |||||||||||||| ||||||||||| || ||||
Sbjct 715252 ACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGCCG 715193
Query 43138 ACTACCAG 43145
||||||||
Sbjct 715192 ACTACCAG 715185
>seq14
Length=654374
Score = 327 bits (362), Expect = 2e-84
Identities = 896/1358 (66%), Gaps = 41/1358 (3%)
Strand=Plus/Minus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
||| || ||||| ||||| || | || || || || ||||||| |||| | || ||
Sbjct 285243 GTTGACAACCTGGAACTCACCAGCGAGAACACGTCGTTGGTAGATGTTGGAGGTGTAGGG 285184
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
||||| || ||| |||||||||| ||||| | || || ||||| ||||| || | |
Sbjct 285183 CTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAG 285124
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGA-TGCGGAGTCTGAGCTCGTTCCAGTCCC 244268
||||||||||| | | |||||| ||| || | | || |||| |||| |
Sbjct 285123 GAGCAGACTGTTACGGATGCCGTGTGTCTTGACTTC-----CT---CTCGAAG-AGTCTC 285073
Query 244269 ACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGC 244328
|| ||| ||||||| | | |||| | ||||||||| ||||| || | ||||
Sbjct 285072 CCAGTCCC-AGAGGTCAGAGGGCTTGACGTTCCACATGTCGAACTGGAGGATACCCTCAG 285014
Query 244329 TGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTC 244387
| ||||| || | | |||| | ||||||||| || || ||||||| || |
Sbjct 285013 AGGCGGGGGAACCTTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAGG 284954
Query 244388 TCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTG 244447
|| |||||| |||| ||| ||||||||||||||| |||||| | || || |||| |
Sbjct 284953 CAGT-GAGGGCAGCGTGGTAAATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCG 284895
Query 244448 CCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATG 244507
| |||||| |||| || | ||| | ||||| || ||||| || || |
Sbjct 284894 GGTGACTCGAAGGGCATGCGCAGAGCAAGGAAAGCATCGGCAAGGCCCTGAACACCAAGA 284835
Query 244508 CCGATGGGTCTGTGTCGCTTGTTGGAGC-GCATGGCTTCGGGCACGGGGTAAAAGTTGCC 244566
|||||||||| ||| ||| |||| | || | || | || || ||||| ||| |
Sbjct 284834 CCGATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGG-ACAGGGTAGTGGTTCAC 284776
Query 244567 GTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGAC-GACGTCGGCCAGCAGCTGAA 244625
||||| | |||||| |||||||| | | || | ||| ||| | | || | || |
Sbjct 284775 ATCGATGATCTTGTTCAGGTTGCGAATAA-CAACCTGACTGACCTTGTGCAACTTCTTGA 284717
Query 244626 AGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGC 244685
|||| || | | |||| || | |||| || | || || |
Sbjct 284716 AGTCATA------GCAAGCCTCATCGTAGTTGATG------AAAGAGGGCAGAGCCAGAG 284669
Query 244686 TGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGA 244745
||| ||||||||||| || ||||| || | | ||||| | ||| || ||||| |
Sbjct 284668 AGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAGTACTCAATAATTTCAGTGCACA 284609
Query 244746 GGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCT 244805
|||| || |||||| || |||| || || ||| |||| ||||||||| ||||
Sbjct 284608 GGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCT 284549
Query 244806 TGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGT 244865
||||||||||||| || |||||||| |||||| | || | | || ||| || |
Sbjct 284548 TGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGTT 284489
Query 244866 CCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCT 244925
| |||||||| ||| ||||| |||||||||| |||||| |||||| ||||
Sbjct 284488 TCTGAGCCTTGATAGTCTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCT 284429
Query 244926 CGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCC 244985
||||||| || | ||| | ||||| |||||| |||||||| || |||
Sbjct 284428 CGAACTCCTCTCCGTAACAGTCGGCGAGGCCAGGGCACTCGTTAGGGCACATCAGCGTCC 284369
Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045
| |||||| | | || | || |||||| || || |||||||| ||||| |||| |
Sbjct 284368 AGTCGCCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCGAGGAAAA 284309
Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105
|||| | || | ||| || || |||||| | || || | || || ||||
Sbjct 284308 GGTCACGGGCACGGACCTCCTCTTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAGA 284249
Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165
| || |||||| ||||| | ||||| || | || ||||| ||||||||||| ||||
Sbjct 284248 CATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCT 284189
Query 245166 GGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTA 245221
|||| | | | ||||| |||||||| || || |||| || | |||||
Sbjct 284188 GGTCGA----CATAGCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCGTTC 284133
Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTG--AGGTTGCTGATGGACA 245279
|| |||||||| || ||||||| ||| | | | | | | ||| | | ||
Sbjct 284132 GATGTACCGTTGGTACCGGCAATGTAGGAGCCAGTAGCACGGATACGGTGC--ACGTTCA 284075
Query 245280 TGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGC 245339
||| | || || || ||||||||| | ||| ||| |||||| || || || |
Sbjct 284074 GGCCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTC 284015
Query 245340 CCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGC 245399
|||| || ||||| |||||| | | || ||||| || |||| ||||||| |||
Sbjct 284014 CCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGG 283955
Query 245400 TGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437
||| | |||||| || ||||| ||| || || |||
Sbjct 283954 TGCCGGCGTTGAAGAGCGTGGGAGAGGCATGTGTGAAG 283917
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944325436256160
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