Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20[genbank_20GCA_5F000733055.2_202015-06-08]
1,166 sequences; 50,550,233 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq47 138 1e-27
>seq47
Length=312199
Score = 138 bits (152), Expect = 1e-27
Identities = 323/482 (67%), Gaps = 9/482 (2%)
Strand=Plus/Plus
Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 159361
|| || ||| | || |||||||||||| ||| || || | || ||| | || ||||
Sbjct 266538 CAGCCCAACTCTGGTGCACAGGGTGAGTTTGCTGGTCT--TCGCTGTATCAAGGCTTACC 266595
Query 159362 ATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 159420
| | ||| || || | ||||| |||| || || | || || | || || || ||
Sbjct 266596 A-CGAGGCTCGTGATGGAGATAAGCGAAAGGTCTGCCTTATCCCTGTTTCGGCTCACGGT 266654
Query 159421 ACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGAT 159480
|| || ||||| || || | ||||| || ||||| ||||| |||||||||||| | |
Sbjct 266655 ACCAACCCTGCTTCTGCTGCCATGGCTGGTATGAAGGTTGTTACTGTCAAGTGTGACGGT 266714
Query 159481 GA---TGGCAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTGAA 159537
| ||||||| | || ||| | ||||| || || ||| | | | ||||
Sbjct 266715 AAGACTGGCAACCTGGATATCGAGGATCTGAAGGCCAAGTGTGTCAAGCACGCTGATGAA 266774
Query 159538 CTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGA 159597
|| | ||| ||| |||| ||||| ||||| ||||| || || | | ||||
Sbjct 266775 CTTGCTGCTATCATGGTTACCTATCCCTCTACTTTCGGTGTCTTCGAGCCTGAGATCAAG 266834
Query 159598 CAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTA 159657
|| | ||| | |||| || ||| |||| |||| || || | || ||||| || |
Sbjct 266835 CAAGTCTGTGATCTTGTCCACGAGCATGGCGGTCTCGTCTACATGGACGGTGCCAACATG 266894
Query 159658 AATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAAC 159717
|| || ||| | ||||| | || |||| |||||| ||||| || ||||| |||
Sbjct 266895 AACGCCCAGATCGGTCTTTGCAGCCCCGGTGATATTGGTGCTGATGTTTGCCATCTCAAC 266954
Query 159718 TTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGT 159777
| || ||||| ||||||||||| || || || || ||||| || || || ||||| | |
Sbjct 266955 CTCCACAAGACCTTCTGTATTCCCCACGGCGGCGGTGGTCCCGGTGTTGGCCCTATCGCT 267014
Query 159778 GT 159779
||
Sbjct 267015 GT 267016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588042629153760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |