Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20[genbank_20GCA_5F000733055.2_202015-06-08]
1,166 sequences; 50,550,233 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq14 349 6e-91
seq10 196 9e-45
>seq14
Length=654374
Score = 349 bits (386), Expect = 6e-91
Identities = 1152/1762 (65%), Gaps = 92/1762 (5%)
Strand=Plus/Minus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | ||| |||||||||||| || || || ||||||||||| |||||
Sbjct 285584 ACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCAGTCTTG 285525
Query 212613 AGGCC---CTTGCCCCAGCCGTGCAT-GTGCATTGCTGTGAGTTTCTTCAGCTTAATATT 212668
||||| ||| |||||| |||| |||||| |||| |||| | || |
Sbjct 285524 AGGCCAAGCTT---CCAGCC-TGCAAAGTGCATACTGGTGA---TCTTGCCC---ATTGT 285475
Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728
|||| | | |||| | |||||| ||||| ||| || ||||| | |
Sbjct 285474 GGGGTCTTTCATGTGG---------ATGTTCAGTGACTGGGACTGATCAATGAAGGCACC 285424
Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788
| ||||| ||||| | | || | | ||| |||| |||||| |||||||| | |
Sbjct 285423 TCGATCAGCAGCCATCTGAACGACTTGGCGCTGAGAGATCTCCCAAACGGTCTTATACAG 285364
Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAG 212848
| |||| || | |||| | ||| |||||||| | || || || ||||
Sbjct 285363 AGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTGAATGGAACC-------ATTCTCAG 285311
Query 212849 C--TGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACC 212900
| || | ||| ||| | ||| ||| || ||| || | ||| ||||| |
Sbjct 285310 CAATG-ATGCGGTTCTTCATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGC 285252
Query 212901 AGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAA 212960
|| |||||||| | |||||| ||||| | ||| || | | ||||| | ||| ||
Sbjct 285251 AGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGTCGTTGGTAGATGTTGGAG 285192
Query 212961 GTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATG 213020
||||||||||||| || ||||||||| ||||||||||| | || ||||| || |||||
Sbjct 285191 GTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCATA 285132
Query 213021 GGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGC---CGAAGC-TC 213076
||||| | || |||||||| | | ||||| | | ||| | ||||| ||
Sbjct 285131 GGAGCAAGGAGCAGACTGTTACGGATGCCGTGT--GTCT-TGACTTCCTCTCGAAGAGTC 285075
Query 213077 TGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAA 213136
| |||||||||| | |||| | ||| |||||||||||||| ||||| |
Sbjct 285074 T-CCCAGTCCCAGAGGTCAGAGGG---------CTTGACGTTCCACATGTCGAACTGGAG 285025
Query 213137 GATGCCTTTGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGG 213192
||| || |||| ||||| || | | | | ||||||||| || | |||||| |
Sbjct 285024 GATACC----CTCAGAGGCGGGGGAACCTTTGAAGGTGGAGTAGGGACCCTCCTCCTTAG 284969
Query 213193 CCAGCTCGCA-GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251
|||||| ||| ||| || |||||||||| ||| ||||| || || |||| | |||||
Sbjct 284968 CCAGCT-GCACGGAGGCAGTGAGGGCAGCGTGGTAAATGGTCTCGAAGATCTGCTTGTTG 284910
Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311
|||| ||||| || ||| ||||||||| || |||| |||| || ||
Sbjct 284909 AGCTCACGAGCCTCGGGTGACTCGAAGGGCATGCGCAGAGCAAGGAAAGCATCGGCAAGG 284850
Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370
||||| || || | |||||||||| ||| | || |||| ||| |||| ||||| |
Sbjct 284849 CCCTGAACACCAAGACCGATGGGTCGGTGGCGCATGTTACTGTTGCGAGC-CTCCTGGAC 284791
Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430
||||| ||| |||||||||||||| |||||||| | | || | |||| |
Sbjct 284790 AGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTT 284731
Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCC--CGTCCTGCACAAACTCAGGCAGGGCG 213488
| || | || ||| | | |||| | ||| | | || ||||| ||
Sbjct 284730 GTGCAACT--TCTTGAAGTCATAGCAAGCCTCATCGTAGTTGATGAAAGAGGGCAGAGCC 284673
Query 213489 ATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTG 213548
| ||| |||||||| || || ||||| | || | | |||||| || || || |||
Sbjct 284672 AGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAGTACTCAATAATTTCAGTG 284613
Query 213549 CACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCA-GA 213607
||||||||| || ||||||||| || ||||||| ||| ||| ||||| | ||| |
Sbjct 284612 CACAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGG-TTGCTCTTGCGGTTGCAGGC 284554
Query 213608 ATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCA 213667
|||||||||||||||| | ||| |||||||| ||||| | | || || | |||
Sbjct 284553 ATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCA 284494
Query 213668 GAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTA 213727
|| | | ||||||| | | ||| | | | | |||||||| ||||||
Sbjct 284493 AAGTTTCTGAGCCTTGA-TAGTCTTGCGACCCTTGCCCTCCT--TCTCGTACTTTTCGTA 284437
Query 213728 GAGCTCGTTGAATTCGTGGCCCCAGACCCT-GTCCAGTCCCGGACAGGATGCGGGACACA 213786
|| | | ||| || | || | || | | | || || || || || ||||
Sbjct 284436 CAGAGCCTCGAACTCCTCTCCGTA-ACAGTCGGCGAGGCCAGGGCACTCGTTAGGGCACA 284378
Query 213787 TGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCG 213846
| || ||||||| |||| | | || | || |||||| || || |||| ||| || |
Sbjct 284377 TCAGCGTCCAGTCGCCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGG 284318
Query 213847 CGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAA 213906
|| ||| ||||| | || | ||| || || ||| || || ||||| || |
Sbjct 284317 CGAGGAAAAGGTCACGGGCACGGACCTCCTCTTTACCGTGGTTCTTACGGAGATCAAGGA 284258
Query 213907 AGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCT 213963
| || |||| || | |||||| ||||| | |||||||||||| || || | || | |
Sbjct 284257 ACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGT 284198
Query 213964 TGCCGCCCTGGTCCACCAGCCTGGCCACCA----TGTTGAAGATGCGCAGGACGGGTACC 214019
|||| |||||||| | | | || | || ||||||||| || || | || ||
Sbjct 284197 TGCCACCCTGGTCGA----CATAGCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACA 284142
Query 214020 AGCCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCT 214078
| ||||| || ||| |||||||| || || || || ||||| | || | | |
Sbjct 284141 ACACCGTTCGA-TGTACCGTTGGTACCGGCAATGTAGGAGCCAGTAGCACGGATACGGTG 284083
Query 214079 CATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTC 214138
|| | || || || ||||| || ||||||||||||||| ||| | | | ||| ||
Sbjct 284082 CACGTTCAGGCCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC 284023
Query 214139 CATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGG 214198
||| || | || ||||| || | | | | ||||||||| || | |||||
Sbjct 284022 GTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGG 283963
Query 214199 CCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAG 214258
| | | ||| | |||||| |||||||| |||||| | | || ||| | || |
Sbjct 283962 CTGAGGGGTGCCGGCGTTGAAGAGCGTGGGAGAGGCATGTGTGAAGAATTTGCTGGACAT 283903
Query 214259 GAGCCTGTAGGTCTCCAGGACT 214280
|| |||| ||||||| ||||
Sbjct 283902 CAGGTTGTATGTCTCCAAGACT 283881
>seq10
Length=724679
Score = 196 bits (216), Expect = 9e-45
Identities = 490/737 (66%), Gaps = 27/737 (4%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| | || | ||||| |||||||| ||||| || | | |||||||||||
Sbjct 715185 CTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 715244
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957
||||||| ||||||||||| | || || ||| | || ||| | | | || |
Sbjct 715245 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAAACCT-TCTCGTTGCCAAGCGCGACAAGGA 715303
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
| |||| |||||| |||| ||||| | ||||||| ||||||||| | ||||
Sbjct 715304 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGGG 715363
Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
||| | ||||| ||||| ||||||| ||| || ||||| || | || |
Sbjct 715364 CGCAGGGAAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTAATGATAT 715423
Query 48078 GCTTAACGCGGGAC-TCTGAGGGTTTGTTGCGCAGGTGC-TTG------GCATAGAGCAT 48129
|| || | |||| ||| || ||| | | ||| | | ||| |
Sbjct 715424 CCT------GGATCATCTGC----TTGCTG-GCACGACCCTTGAGGTGAGAGTGGAGGAG 715472
Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189
|||||||||||| |||| | || || || || ||||||| ||||||||||| ||
Sbjct 715473 GCAGGCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAG 715532
Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249
||| ||||||| || | || ||||||||||| || | ||||| | ||| ||||||
Sbjct 715533 ACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAA 715592
Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309
||| ||||| || || ||||| || ||| | || | || || | || ||| ||
Sbjct 715593 GATACCCTCAACAGCAGCGAAAGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTG 715652
Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCG 48369
|||||| | |||||||| |||||||| |||||| || || ||||| |||||
Sbjct 715653 GATCCATCGGATGGCCCAGTCGGCCTTCTTTCGGATGCAGGGGATGGTCTCAATGGCGTT 715712
Query 48370 GAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTA 48426
||||| | | | || | | ||| | ||||| | ||||||| | |||
Sbjct 715713 AAAGAGGTAGGTTCGCTGGGCGGGCTCCTTGATGTAGGTGTCAATGAGCAG---GGAGTA 715769
Query 48427 CATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAA 48486
|||| ||||| | ||||| || ||||||||| ||||||||| | |||||
Sbjct 715770 GGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCGGG 715829
Query 48487 CACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGC 48546
| ||| || || ||||| ||| | || ||||| ||||| || ||||| || ||
Sbjct 715830 GATCTGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGACGC 715889
Query 48547 AGCAAAGAAGGCAAGGA 48563
||| ||||| |||||||
Sbjct 715890 AGCGAAGAAAGCAAGGA 715906
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931519222909440
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