Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F000733055.2_202015-06-08] 1,166 sequences; 50,550,233 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq14 96.9 3e-14 seq5 87.8 1e-11 >seq14 Length=654374 Score = 96.9 bits (106), Expect = 3e-14 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| || |||||| || |||| || |||||||| ||||||||||| | || |||||| Sbjct 569697 GGTAAGGAGGGTCGTCTTCGAGGTAACTTGATGGGTAAGCGTGTCGACTTTTCGGCACGT 569756 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || |||||| |||| | || || |||| | || || ||||| |||| || |||| Sbjct 569757 ACTGTCATTACTGGTGATGCCAACCTTTCTCTACACGAGGTCGGTGTCCCTCGCAGTATT 569816 Query 432408 GCGAAAAATCTTACTTTTGACGAAATTGTAACA 432440 || | | || || | | ||||| ||| ||| Sbjct 569817 GCCAGGACCCTCACCTATCCCGAAACTGTGACA 569849 >seq5 Length=990607 Score = 87.8 bits (96), Expect = 1e-11 Identities = 278/429 (65%), Gaps = 3/429 (1%) Strand=Plus/Plus Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 ||| ||||| ||| || ||||| ||| || || || |||| | || || | Sbjct 791602 ATTGGTAATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACGGCGGAGACGTTCAT 791661 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499 ||||| |||||||| | ||| || ||||| ||||| || || || || | | ||||| Sbjct 791662 GATACCGTTGGCATCAAGATCGAAGGTGACCTCAATCTGGGGAACACCACGGGGGGCAGG 791721 Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559 ||||| || | | || | |||| | || || || || ||| || || || Sbjct 791722 GGGGATACCAGTGAGCTCGAACTTGCCCATAAGGTTGTTGTCCTTGGTGCGTTGACGCTC 791781 Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 281619 ||||||| | | |||||| ||| ||| || || || || | || | || || Sbjct 791782 ACCCTCGTAGACCTGGATAAGAACACCAGGCTGGTTGTCGGAGAAGGTGGAGAAGACCTC 791841 Query 281620 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679 ||| || || || || || ||||| | || | |||||||| ||||||||||| Sbjct 791842 GGACTTCTTGGTGGGGATGGTGGTGTTGCGGGGGATGAGCTTGGTCATCATACCACCAGC 791901 Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 281737 || || | ||| ||||| || || | ||||| | || | ||| | || | || || Sbjct 791902 GGTCTCGATACCGAGAGAGAGGGGCGCAACATCGAGAAGCAGAATCTCGTTGGTAGCCTT 791961 Query 281738 TCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796 | | || | ||| ||||| || || || | || ||||| || |||||||| || Sbjct 791962 GCTGGAGGTGTCACCGGAGAGAATCGCAGCCTGGACGGCGGCACCGTAGGCAACAGCCTC 792021 Query 281797 ATCAGGATT 281805 |||||| || Sbjct 792022 ATCAGGGTT 792030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740573154327516