Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F000733055.2_202015-06-08] 1,166 sequences; 50,550,233 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq11 96.9 3e-15 >seq11 Length=712715 Score = 96.9 bits (106), Expect = 3e-15 Identities = 270/409 (66%), Gaps = 19/409 (5%) Strand=Plus/Plus Query 19348 GGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGT 19407 ||||| | ||||||||||| || || ||| |||||| | ||||| || || | || Sbjct 629244 GGACTACTACTTTATGGGCCCCCAGGAACTGGTAAAACACTGATTGCCCGACAATTAGGT 629303 Query 19408 AAATTACTTACAAAAC----AACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAA 19463 ||| ||| | |||| | || || || ||||| ||||| || ||| | | ||||| Sbjct 629304 AAA--ACT--CTAAACGCCCATCCACCTAAGATTGTCAATGGCCCCGAAGTGCTGAATAA 629359 Query 19464 ATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACA 19523 | ||| |||||||| || || || | || |||| || || || || |||| | Sbjct 629360 GTTTGTTGGTCAATCCGAGGAGAACATCAGAAAGCTGTTCGCAGATGCAGAGAAAGAGTA 629419 Query 19524 AAAACGTTTAGGGCG-CAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAA 19582 || | |||| | | | ||| | | ||||| || || | ||||| | || || Sbjct 629420 TAAG-GAAAAGGGAGACGAGAGTGGTCTTCACATCATCATCTTTGATGAGCTTGATGCTG 629478 Query 19583 TCTGTAAGCAAAGAGGTTCTGGTGTAAATGGAGT-ACA--------TGACACTGTTGTCA 19633 | |||||||| |||||||||| ||| | ||| ||| |||||||||| Sbjct 629479 TTTGTAAGCAGCGAGGTTCTGGATCTGGTGGCGGCACAGGTGTTGGTGATACTGTTGTCA 629538 Query 19634 ATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCA 19693 | || ||||| | ||| | || ||||| || |||| || ||||| | | || |||| Sbjct 629539 ACCAGCTCCTTGCCAAACTCGATGGTGTGGACAAACTTAACAATATCCTTTTGATCGGCA 629598 Query 19694 TGACTAATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCG 19742 |||| ||| || ||| | || ||| || || |||||||||| || Sbjct 629599 TGACCAATCGAAAGGATATGATCGACGAGGCTTTGCTACGACCCGGACG 629647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397450351901830