Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F001599515.1_202016-03-01] 19 sequences; 46,178,503 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 3e-14 >seq2 Length=5316833 Score = 95.1 bits (104), Expect = 3e-14 Identities = 167/242 (69%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 248783 TGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGC 248842 ||||| || |||| ||| | | ||||| | ||| | | ||||| ||||| || Sbjct 1654175 TGGACTCTGCCATTGTCTATGACCGCGATTTCCAATACCAATACTTTGGCTTCAAGACTT 1654116 Query 248843 TGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGT 248902 ||||| ||| || |||||||| ||||| || ||||| || || || |||||||||| Sbjct 1654115 TGGAGCGATCATACCTCCTCAAGATTGACGGTAAGATTGTCGAGCGCCCTCAGCACATGA 1654056 Query 248903 TGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACA 248962 | ||||| ||| |||| || || ||||| || ||| | || | ||||| |||| Sbjct 1654055 TCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATTGAGCGAGTCTTGGAGACATACA 1653996 Query 248963 CCGGAATG---AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTA 249019 | ||| || || || | || |||||| | || ||||||||||||||||| | Sbjct 1653995 ACCTTATGTCCAGCAAATTCT---TCACGCATGCCTCTCCCACGCTCTTCAACGCCGGCA 1653939 Query 249020 CC 249021 || Sbjct 1653938 CC 1653937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766138604992