Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F001599515.1_202016-03-01] 19 sequences; 46,178,503 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 2e-11 >seq6 Length=4319897 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/187 (71%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTT--GGAATCCTCCAGCTGTTTTC 94868 ||||||||||| || | ||| || ||| || || ||| | ||| || || || |||| Sbjct 3144665 GTAGATTCCTTCTGAATGTTGTAGTCG-GCA-AGGGTTCGGCCATCTTCGAGTTGCTTTC 3144608 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 | ||||||| | | ||||| || ||||| || || |||||||| | ||| |||| || Sbjct 3144607 CAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCTTTGTCCTGAATCTTTGACT 3144548 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 |||| | ||| || || | ||||| |||| |||||||| || ||||| || | Sbjct 3144547 TGACATTGTCGATGGTATCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGG 3144488 Query 94989 TTTTCAC 94995 |||| || Sbjct 3144487 TTTTGAC 3144481 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | |||||||||||| || | ||| || ||| | ||| | |||||| Sbjct 3144905 ACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCA 3144846 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || || || || | ||||| | || || ||||| ||||||||||| || ||||| | Sbjct 3144845 AGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCGGGAGGAATACCCTCCTTGTCTTGG 3144786 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||| ||| | | || || | ||||| || | || ||||| ||| Sbjct 3144785 ATCTTGCTCTTCACGTTATCAATGGTATCGGATGACTCGACTTCCAGGGTAATGGTCTTT 3144726 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || || || ||||| ||||| Sbjct 3144725 CCAGTGAGGGTCTTGACGAAGATTTGCAT 3144697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448291093530840