Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F001599515.1_202016-03-01] 19 sequences; 46,178,503 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq6 107 2e-18 >seq6 Length=4319897 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 24003 GTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAG 24062 || ||||| | ||||| || | || || | || |||||| | ||| |||||||| Sbjct 3144481 GTCAAAACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCGTCCGATACCATCGAC 3144540 Query 24063 CAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATT 24122 | ||||| ||||||| |||||||| ||||| ||||| || || ||| | ||||| Sbjct 3144541 AATGTCAAGTCAAAGATTCAGGACAAAGAGGGCATCCCTCCTGACCAGCAGCGCCTGATC 3144600 Query 24123 TACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAA 24182 | | || |||||||||||||||| | ||| | | ||| || |||||||| || ||| Sbjct 3144601 TTTGCTGGAAAGCAACTCGAAGATGGCCGAACCCTTGCCGACTACAACATTCAGAAGGAA 3144660 Query 24183 TCTACAATTCAT 24194 ||||| ||||| Sbjct 3144661 TCTACCCTTCAT 3144672 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | |||||||| | |||||| | ||||||||| | | Sbjct 3144697 ATGCAAATCTTCGTCAAGACCCTCACTGGAAAGACCATTACCCTGGAAGTCGAGTCATCC 3144756 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || || ||||| ||||| || || || |||||||||||| Sbjct 3144757 GATACCATTGATAACGTGAAGAGCAAGATCCAAGACAAGGAGGGTATTCCTCCCGATCAA 3144816 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| |||| || | || ||||||||||| || |||| | ||| | ||| || ||| Sbjct 3144817 CAGCGACTCATCTTCGCTGGCAAGCAACTTGAGGATGGCCGAACTCTTTCCGACTACAAC 3144876 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || |||||||| Sbjct 3144877 ATCCAGAAGGAATCTAC 3144893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935900442945