Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F001599515.1_202016-03-01] 19 sequences; 46,178,503 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq6 107 2e-18 >seq6 Length=4319897 Score = 107 bits (118), Expect = 2e-18 Identities = 150/206 (73%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||||||| || ||||||| |||| || ||||| || Sbjct 3144187 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 3144246 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||||||||| || || ||| | || | ||| ||||| || || ||||| || ||| Sbjct 3144247 GACACTATCGA--CAATGTTAAGTCCAAGATTCA-GGACAAGGAGGGCATTCCCCCCGAC 3144303 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | ||||| |||||||| || | || || | ||||| | |||||| Sbjct 3144304 CAGCAACGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACCCTCTCTGATTAC 3144363 Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201 || ||||| || || ||||| || || Sbjct 3144364 AACATTCAGAAGGAGTCCACTCTTCA 3144389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327899657485