Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F001599515.1_202016-03-01] 19 sequences; 46,178,503 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq6 134 2e-26 >seq6 Length=4319897 Score = 134 bits (148), Expect = 2e-26 Identities = 322/482 (67%), Gaps = 9/482 (2%) Strand=Plus/Minus Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 159361 ||||| ||| | || | |||||||||| ||| || || | || ||| | || |||| Sbjct 1616805 CAACCCAACTCTGGTGCTCAGGGTGAGTTTGCTGGTCT--TCGCTGTATCAAGGCTTACC 1616748 Query 159362 ATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 159420 | | ||| || || | ||||| |||| || || | || || | || || || || Sbjct 1616747 A-CGAGGCTCGTGATGGAGATAAGCGAAAGGTCTGCCTTATCCCTGTTTCTGCTCACGGT 1616689 Query 159421 ACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGAT 159480 || || ||||| || || | ||||| || ||||| ||||| |||||||||||| | | Sbjct 1616688 ACCAACCCTGCTTCTGCTGCCATGGCTGGTATGAAGGTTGTTACTGTCAAGTGTGACGGT 1616629 Query 159481 GA---TGGCAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTGAA 159537 | ||| ||| | || ||| | ||||| || || ||| | | | ||| Sbjct 1616628 AAGACTGGTAACCTGGATATCGAGGATCTGAAGGCCAAGTGTGTCAAGCACGCTGATGAG 1616569 Query 159538 CTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGA 159597 || | ||| ||| |||| ||||| ||||| || || || || | | |||| Sbjct 1616568 CTTGCTGCTATCATGGTTACCTATCCCTCTACTTTCGGCGTCTTCGAGCCTGAGATCAAG 1616509 Query 159598 CAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTA 159657 || | ||| | |||| || ||| |||| |||| || || | || ||||| || | Sbjct 1616508 CAAGTCTGTGATCTTGTCCACGAGCATGGCGGTCTCGTCTACATGGACGGTGCCAACATG 1616449 Query 159658 AATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAAC 159717 || || || | ||||| | || ||||| |||||| ||||| || ||||| ||| Sbjct 1616448 AACGCCCAAATCGGTCTTTGCAGCCCCGGTGACATTGGTGCTGATGTCTGCCATCTCAAC 1616389 Query 159718 TTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGT 159777 | || ||||| ||||||||||| || || ||||| ||||| || || |||||||| | | Sbjct 1616388 CTCCACAAGACCTTCTGTATTCCCCACGGCGGTGGCGGTCCCGGTGTTGGTCCTATCGCT 1616329 Query 159778 GT 159779 || Sbjct 1616328 GT 1616327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588051060337840