Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F001599515.1_202016-03-01] 19 sequences; 46,178,503 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1 100 2e-15 >seq1 Length=6424668 Score = 100 bits (110), Expect = 2e-15 Identities = 281/429 (66%), Gaps = 3/429 (1%) Strand=Plus/Plus Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 ||| ||||| ||| || ||||| ||| || || || |||| | || || | Sbjct 4305133 ATTGGTAATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACGGCGGAGACGTTCAT 4305192 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499 ||||| |||||||| | ||| || ||||| ||||| || || || || | | ||||| Sbjct 4305193 GATACCGTTGGCATCAAGATCGAAAGTGACCTCAATCTGGGGAACACCACGAGGGGCAGG 4305252 Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559 ||||| || | | || | |||| | || || || |||||| | || || Sbjct 4305253 GGGGATACCAGTGAGCTCGAACTTGCCCATAAGGTTGTTGTCCTTAGTGCGCTGGCGCTC 4305312 Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 281619 ||||||| ||| |||||| ||| ||| || || || || |||| | || || Sbjct 4305313 ACCCTCGTAAACCTGGATAAGAACACCAGGCTGGTTGTCGGAGAAAGTGGAGAAGACCTC 4305372 Query 281620 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679 ||| || || || || || ||||| | |||| |||||||| ||||||||||| Sbjct 4305373 GGACTTCTTGGTGGGGATGGTGGTGTTGCGGGGGATAAGCTTGGTCATCATACCACCAGC 4305432 Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 281737 || || | ||| ||||| ||||| | |||||| | || | || | || | | || Sbjct 4305433 GGTCTCAATACCGAGAGAGAGAGGGGCGACATCGAGAAGCAGGATCTCGTTGGTGGCCTT 4305492 Query 281738 TCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796 | | || | ||| ||||| || || || | || ||||| || |||||||| || Sbjct 4305493 GCTGGAGGTGTCACCGGAGAGAATCGCGGCCTGGACGGCGGCACCGTAGGCAACAGCCTC 4305552 Query 281797 ATCAGGATT 281805 |||||| || Sbjct 4305553 ATCAGGGTT 4305561 Score = 100 bits (110), Expect = 2e-15 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| || |||||| || |||| || |||||||| ||||||||||| | || |||||| Sbjct 4580590 GGTAAGGAGGGTCGTCTTCGAGGTAACTTGATGGGTAAGCGTGTCGACTTTTCGGCACGT 4580649 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || |||||| |||| | || || |||| | || || ||||| |||| || |||| Sbjct 4580650 ACTGTCATTACTGGTGATGCCAACCTTTCTCTACACGAGGTCGGTGTCCCTCGCAGTATT 4580709 Query 432408 GCGAAAAATCTTACTTTTGACGAAATTGTAACA 432440 || | | || |||| | ||||| ||| ||| Sbjct 4580710 GCCAGGACCCTCACTTATCCCGAAACTGTGACA 4580742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740629467180294